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xapB xanthosine:H(+) symporter XapB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946868, updated on 11-Apr-2024

Summary

Gene symbol
xapB
Gene description
xanthosine:H(+) symporter XapB
Primary source
ASAP:ABE-0007925
Locus tag
b2406
See related
ECOCYC:EG13159
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2400
Summary
NupG, XapB and YegT are paralogs. [More information is available at EcoGene: EG13159]. XapB is a probable xanthosine transporter. [More information is available at EcoCyc: EG13159].
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Genomic context

Sequence:
NC_000913.3 (2522729..2523985, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA-Lys Neighboring gene DNA-binding transcriptional activator XapR Neighboring gene xanthosine phosphorylase Neighboring gene putative outer membrane porin YfeN

Pathways from PubChem

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables cytidine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleoside transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleoside transmembrane transporter activity ISA
Inferred from Sequence Alignment
more info
PubMed 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables uridine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables xanthosine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in cytidine transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within nucleobase-containing small molecule metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nucleoside transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in nucleoside transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within nucleoside transport ISA
Inferred from Sequence Alignment
more info
PubMed 
involved_in organic substance transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in uridine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in xanthosine transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
xanthosine:H(+) symporter XapB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2522729..2523985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416901.1 xanthosine:H(+) symporter XapB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416901.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9A8D6
    Conserved Domains (1) summary
    TIGR00889
    Location:1418
    2A0110; nucleoside transporter