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ssuC aliphatic sulfonate ABC transporter membrane subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947216, updated on 4-Apr-2024

Summary

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Gene symbol
ssuC
Gene description
aliphatic sulfonate ABC transporter membrane subunit
Primary source
ASAP:ABE-0003175
Locus tag
b0934
See related
ECOCYC:G6476
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0925; ycbM
Summary
Topology mapped using protein fusions. [More information is available at EcoGene: EG13705]. SsuC is the integral membrane component of the alkanesulfonate ABC transporter. [More information is available at EcoCyc: G6476].
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Genomic context

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Sequence:
NC_000913.3 (994041..994832, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene nicotinate phosphoribosyltransferase Neighboring gene aminopeptidase N Neighboring gene aliphatic sulfonate ABC transporter ATP binding subunit Neighboring gene FMNH2-dependent alkanesulfonate monooxygenase Neighboring gene aliphatic sulfonate ABC transporter periplasmic binding protein Neighboring gene NADPH-dependent FMN reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sulfonate-sulfur metabolism and its regulation in Escherichia coli. van der Ploeg JR, et al. Arch Microbiol, 2001 Jul. PMID 11479697
  2. Deletion analysis of the Escherichia coli taurine and alkanesulfonate transport systems. Eichhorn E, et al. J Bacteriol, 2000 May. PMID 10781534, Free PMC Article
  3. Rapid topology mapping of Escherichia coli inner-membrane proteins by prediction and PhoA/GFP fusion analysis. Drew D, et al. Proc Natl Acad Sci U S A, 2002 Mar 5. PMID 11867724, Free PMC Article
  4. The switch from inorganic to organic sulphur assimilation in Escherichia coli: adenosine 5'-phosphosulphate (APS) as a signalling molecule for sulphate excess. Bykowski T, et al. Mol Microbiol, 2002 Mar. PMID 11918818
  5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in cellular response to sulfur starvation NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within sulfur compound metabolic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
aliphatic sulfonate ABC transporter membrane subunit
NP_415454.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    994041..994832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415454.4 aliphatic sulfonate ABC transporter membrane subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415454.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X3J368, A0A2X6ZR10, F4TCG2
    Conserved Domains (1) summary
    PRK11365
    Location:1 → 263
    ssuC; aliphatic sulfonate ABC transporter permease SsuC
Nucleotide Protein
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