U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ydeA L-arabinose exporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947218, updated on 4-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
ydeA
Gene description
L-arabinose exporter
Primary source
ASAP:ABE-0005103
Locus tag
b1528
See related
ECOCYC:EG11636
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1521
Summary
Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG11636]. YdeA is a member of the major facilitator superfamily (MFS) of transporters . [More information is available at EcoCyc: EG11636].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1617028..1618218)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative DNA-binding transcriptional regulator YneJ Neighboring gene protein YneK Neighboring gene inner membrane protein MarC Neighboring gene DNA-binding transcriptional repressor MarR

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Escherichia coli gene ydeA encodes a major facilitator pump which exports L-arabinose and isopropyl-beta-D-thiogalactopyranoside. Carolé S, et al. J Bacteriol, 1999 Aug. PMID 10438792, Free PMC Article
  2. Transcriptional activation of ydeA, which encodes a member of the major facilitator superfamily, interferes with arabinose accumulation and induction of the Escherichia coli arabinose PBAD promoter. Bost S, et al. J Bacteriol, 1999 Apr. PMID 10094697, Free PMC Article
  3. Genetic and functional analysis of the multiple antibiotic resistance (mar) locus in Escherichia coli. Cohen SP, et al. J Bacteriol, 1993 Mar. PMID 8383113, Free PMC Article
  4. Analysis of a complete library of putative drug transporter genes in Escherichia coli. Nishino K, et al. J Bacteriol, 2001 Oct. PMID 11566977, Free PMC Article
  5. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
L-arabinose exporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1617028..1618218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416045.1 L-arabinose exporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416045.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376S6E6
    Conserved Domains (1) summary
    PRK03545
    Location:5 → 394
    PRK03545; putative arabinose transporter; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.