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ssuB aliphatic sulfonate ABC transporter ATP binding subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947220, updated on 6-Oct-2023

Summary

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Gene symbol
ssuB
Gene description
aliphatic sulfonate ABC transporter ATP binding subunit
Primary source
ASAP:ABE-0003173
Locus tag
b0933
See related
ECOCYC:EG12358
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0924; ycbE
Summary
SsuB is the ATP-binding component of the alkanesulfonate ABC transporter. [More information is available at EcoCyc: EG12358].
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Genomic context

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Sequence:
NC_000913.3 (993277..994044, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene nicotinate phosphoribosyltransferase Neighboring gene aminopeptidase N Neighboring gene aliphatic sulfonate ABC transporter membrane subunit Neighboring gene FMNH2-dependent alkanesulfonate monooxygenase Neighboring gene aliphatic sulfonate ABC transporter periplasmic binding protein Neighboring gene NADPH-dependent FMN reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The nucleotide sequence of the pepN gene and its over-expression in Escherichia coli. McCaman MT, et al. Gene, 1986. PMID 3549459
  2. Sulfonate-sulfur metabolism and its regulation in Escherichia coli. van der Ploeg JR, et al. Arch Microbiol, 2001 Jul. PMID 11479697
  3. Deletion analysis of the Escherichia coli taurine and alkanesulfonate transport systems. Eichhorn E, et al. J Bacteriol, 2000 May. PMID 10781534, Free PMC Article
  4. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
  5. The Escherichia coli ATP-binding cassette (ABC) proteins. Linton KJ, et al. Mol Microbiol, 1998 Apr. PMID 9593292

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding ISM
Inferred from Sequence Model
more info
 PubMed 
enables ATP binding RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cellular response to sulfur starvation NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
aliphatic sulfonate ABC transporter ATP binding subunit
NP_415453.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    993277..994044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415453.1 aliphatic sulfonate ABC transporter ATP binding subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415453.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1KV01
    Conserved Domains (1) summary
    PRK11247
    Location:1 → 255
    ssuB; aliphatic sulfonates transport ATP-binding subunit; Provisional
Nucleotide Protein
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