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scpC propionyl-CoA:succinate CoA transferase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947402, updated on 2-May-2024

Summary

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Gene symbol
scpC
Gene description
propionyl-CoA:succinate CoA transferase
Primary source
ASAP:ABE-0009583
Locus tag
b2920
See related
ECOCYC:G7517
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2916; ygfH
Summary
Part of a four gene operon encoding enzymes converting succinate to propionate. [More information is available at EcoGene: EG12973]. The ygfH-encoded enzyme is a CoA transferase. [More information is available at EcoCyc: G7517].
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Genomic context

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Sequence:
NC_000913.3 (3064802..3066280)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene methylmalonyl-CoA mutase Neighboring gene methylmalonyl-CoA mutase-interacting GTPase YgfD Neighboring gene methylmalonyl-CoA decarboxylase Neighboring gene putative DNA-binding transcriptional regulator YgfI Neighboring gene DUF541 domain-containing protein YggE Neighboring gene L-arginine exporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
  2. Discovering new enzymes and metabolic pathways: conversion of succinate to propionate by Escherichia coli. Haller T, et al. Biochemistry, 2000 Apr 25. PMID 10769117
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables acetate CoA-transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables acetate CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acetyl-CoA hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables propionyl-CoA:succinate CoA-transferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables propionyl-CoA:succinate CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in acetate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in acetate metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in acetyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
propionyl-CoA:succinate CoA transferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3064802..3066280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417395.1 propionyl-CoA:succinate CoA transferase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417395.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A895NW73, A0A8T5YBF0
    Conserved Domains (1) summary
    TIGR03458
    Location:7 → 489
    YgfH_subfam; succinate CoA transferase
Nucleotide Protein
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Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials