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atoD acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947525, updated on 4-Apr-2024

Summary

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Gene symbol
atoD
Gene description
acetyl-CoA:acetoacetyl-CoA transferase subunit alpha
Primary source
ASAP:ABE-0007347
Locus tag
b2221
See related
ECOCYC:EG11669
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2214
Summary
Based on sequence similarity, AtoD is predicted to be an acetate CoA-transferase . [More information is available at EcoCyc: EG11669].
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Genomic context

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Sequence:
NC_000913.3 (2323447..2324109)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene histidine kinase RcsC Neighboring gene sensor histidine kinase AtoS Neighboring gene DNA-binding transcriptional activator/ornithine decarboxylase inhibitor AtoC Neighboring gene acetyl-CoA:acetoacetyl-CoA transferase subunit beta Neighboring gene short chain fatty acid transporter Neighboring gene acetyl-CoA acetyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Escherichia coli coenzyme A-transferase: kinetics, catalytic pathway and structure. Sramek SJ, et al. Arch Biochem Biophys, 1975 Nov. PMID 1103741
  2. Purification and properties of Escherichia coli coenzyme A-transferase. Sramek SJ, et al. Arch Biochem Biophys, 1975 Nov. PMID 1103739
  3. Substrate-induced conformational changes and half-the-sites reactivity in the Escherichia coli CoA transferase. Sramek SJ, et al. Arch Biochem Biophys, 1977 Jun. PMID 332081
  4. Interactions of the antizyme AtoC with regulatory elements of the Escherichia coli atoDAEB operon. Matta MK, et al. J Bacteriol, 2007 Sep. PMID 17616594, Free PMC Article
  5. Genetic and molecular characterization of the genes involved in short-chain fatty acid degradation in Escherichia coli: the ato system. Jenkins LS, et al. J Bacteriol, 1987 Jan. PMID 3025185, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables CoA-transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acetate CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables butyrate-acetoacetate CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in short-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acetyl-CoA:acetoacetyl-CoA transferase subunit alpha
NP_416725.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2323447..2324109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416725.1 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416725.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A9X6RZE5
    Conserved Domains (1) summary
    PRK09920
    Location:1 → 219
    PRK09920; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; Provisional
Nucleotide Protein
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