U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

pgpA phosphatidylglycerophosphatase A [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947542, updated on 4-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
pgpA
Gene description
phosphatidylglycerophosphatase A
Primary source
ASAP:ABE-0001454
Locus tag
b0418
See related
ECOCYC:EG10704
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0412; yajN
Summary
The pgpA gene is nonessential. [More information is available at EcoGene: EG10704].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (436589..437107)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase Neighboring gene transcription antitermination protein NusB Neighboring gene thiamine monophosphate kinase Neighboring gene 1-deoxyxylulose-5-phosphate synthase YajO Neighboring gene 1-deoxy-D-xylulose-5-phosphate synthase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Membrane-bound phosphatases in Escherichia coli: sequence of the pgpA gene. Icho T. J Bacteriol, 1988 Nov. PMID 2846510, Free PMC Article
  2. Multiple genes for membrane-bound phosphatases in Escherichia coli and their action on phospholipid precursors. Icho T, et al. J Bacteriol, 1983 Feb. PMID 6296050, Free PMC Article
  3. Phosphatidyl glycerophosphate phosphatase. Chang YY, et al. J Lipid Res, 1967 Sep. PMID 4292860
  4. NrdR controls differential expression of the Escherichia coli ribonucleotide reductase genes. Torrents E, et al. J Bacteriol, 2007 Jul. PMID 17496099, Free PMC Article
  5. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables lipid phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables lipid phosphatase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidylglycerophosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phosphatidylglycerophosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidylglycerophosphatase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables phosphatidylglycerophosphatase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within glycerophospholipid biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in phosphatidylglycerol biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in phosphatidylglycerol biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in phospholipid dephosphorylation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in phospholipid dephosphorylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to magnesium ion IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in plasma membrane TAS
Traceable Author Statement
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phosphatidylglycerophosphatase A
NP_414952.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    436589..437107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414952.1 phosphatidylglycerophosphatase A [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414952.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376MTD9, A0A418GZP8, A0A485JKT1, A0A5D8M3H4
    Conserved Domains (1) summary
    PRK11068
    Location:8 → 171
    PRK11068; phosphatidylglycerophosphatase A; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.