U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gltD glutamate synthase subunit GltD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947723, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
gltD
Gene description
glutamate synthase subunit GltD
Primary source
ASAP:ABE-0010547
Locus tag
b3213
See related
ECOCYC:EG10404
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
aspB; ECK3203; ossB; psiQ
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (3359198..3360616)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene radical SAM family oxidoreductase YhcC Neighboring gene glutamate synthase subunit GltB Neighboring gene periplasmic protein GltF Neighboring gene putative fimbrial chaperone YhcA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Cloning and sequencing of the gene for the Thiobacillus ferrooxidans ATCC33020 glutamate synthase (GOGAT) small subunit and complementation of an Escherichia coli gltD mutant. Deane SM, et al. Gene, 1996 Oct 24. PMID 8921877
  2. Structural organization of the genes that encode two glutamate synthase subunits of Escherichia coli. Garciarrubio A, et al. Gene, 1983 Dec. PMID 6368318
  3. Determination of the nucleotide sequence for the glutamate synthase structural genes of Escherichia coli K-12. Oliver G, et al. Gene, 1987. PMID 3326786
  4. Amino acid sequence analysis of the glutamate synthase enzyme from Escherichia coli K-12. Gosset G, et al. Protein Seq Data Anal, 1989. PMID 2643092
  5. Characterization of the gltF gene product of Escherichia coli. Grassl G, et al. FEMS Microbiol Lett, 1999 Oct 1. PMID 10481090

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on mature peptide
    Title: '98 Escherichia coli SWISS-2DPAGE database update.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables glutamate synthase (NADPH) activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables glutamate synthase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in L-glutamate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in ammonia assimilation cycle IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within glutamate biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in glutamate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
part_of glutamate synthase complex (NADPH) IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glutamate synthase subunit GltD
NP_417680.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3359198..3360616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417680.1 glutamate synthase subunit GltD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417680.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9ADL9
    Conserved Domains (1) summary
    TIGR01318
    Location:6 → 472
    gltD_gamma_fam; glutamate synthase small subunit family protein, proteobacterial
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.