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ugpB sn-glycerol 3-phosphate ABC transporter periplasmic binding protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947962, updated on 4-Apr-2024

Summary

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Gene symbol
ugpB
Gene description
sn-glycerol 3-phosphate ABC transporter periplasmic binding protein
Primary source
ASAP:ABE-0011274
Locus tag
b3453
See related
ECOCYC:EG11047
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3437; psiB; psiC
Summary
Pho regulon. [More information is available at EcoGene: EG11047]. The UgpABCE glycerol-3-phosphate uptake system is a member of the ATP-Binding Cassette (ABC) Superfamily . [More information is available at EcoCyc: EG11047].
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Genomic context

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Sequence:
NC_000913.3 (3591009..3592325, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glycerophosphodiester phosphodiesterase UgpQ Neighboring gene sn-glycerol 3-phosphate ABC transporter ATP binding subunit Neighboring gene sn-glycerol 3-phosphate ABC transporter membrane subunit UgpE Neighboring gene sn-glycerol 3-phosphate ABC transporter membrane subunit UgpA Neighboring gene branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF Neighboring gene branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG Neighboring gene branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A metabolite binding protein moonlights as a bile-responsive chaperone.
    Title: A metabolite binding protein moonlights as a bile-responsive chaperone.
  2. Mutations in the ugpBAECQ operon (Ugp)eliminated the ability of phoA-deleted E. coli to utilize glycerol-2-phosphate (G2P)suggesting that G2P is a previously unrecognized substrate for the binding protein-dependent Ugp transporter.
    Title: Uptake of glycerol-2-phosphate via the ugp-encoded transporter in Escherichia coli K-12.
  3. N-terminus verified by Edman degradation on mature peptide
    Title: Nucleotide sequence of the ugp genes of Escherichia coli K-12: homology to the maltose system.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within glycerol-3-phosphate transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in glycerol-3-phosphate transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within glycerol-3-phosphate transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within glycerophosphodiester transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in organic substance transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of glycerol-3-phosphate-transporting ATPase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
 PubMed 
located_in outer membrane-bounded periplasmic space IEA
Inferred from Electronic Annotation
more info
  
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
sn-glycerol 3-phosphate ABC transporter periplasmic binding protein
NP_417910.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3591009..3592325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417910.1 sn-glycerol 3-phosphate ABC transporter periplasmic binding protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417910.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6L7C8I2, A0AA88EJQ8
    Conserved Domains (1) summary
    PRK10974
    Location:18 → 437
    PRK10974; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB
Nucleotide Protein
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Gene LinkOut

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