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dtpB dipeptide/tripeptide:H(+) symporter DtpB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948006, updated on 23-Nov-2023

Summary

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Gene symbol
dtpB
Gene description
dipeptide/tripeptide:H(+) symporter DtpB
Primary source
ASAP:ABE-0011417
Locus tag
b3496
See related
ECOCYC:EG12232
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3481; yhiP
Summary
Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG12232]. The YhiP protein is an uncharacterised member of the POT family of peptide transporters . [More information is available at EcoCyc: EG12232].
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Genomic context

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Sequence:
NC_000913.3 (3640862..3642331)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene universal stress protein A Neighboring gene protein YriA Neighboring gene protein YriB Neighboring gene 16S rRNA m(2)G1516 methyltransferase Neighboring gene oligopeptidase A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DtpB (YhiP) and DtpA (TppB, YdgR) are prototypical proton-dependent peptide transporters of Escherichia coli. Harder D, et al. FEBS J, 2008 Jul. PMID 18485005
  2. Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli. Tavazoie S, et al. Nat Biotechnol, 1998 Jun. PMID 9624689
  3. The POT family of transport proteins. Paulsen IT, et al. Trends Biochem Sci, 1994 Oct. PMID 7817396
  4. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212
  5. The major facilitator superfamily. Saier MH Jr, et al. J Mol Microbiol Biotechnol, 1999 Nov. PMID 10943556

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. DtpB (YhiP) and DtpA (TppB, YdgR) are prototypical proton-dependent peptide transporters of Escherichia coli
    Title: DtpB (YhiP) and DtpA (TppB, YdgR) are prototypical proton-dependent peptide transporters of Escherichia coli.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables dipeptide transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables dipeptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables peptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables peptide:proton symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptide:proton symporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables peptide:proton symporter activity IEA
Inferred from Electronic Annotation
more info
  
enables proton transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables tripeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables tripeptide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables tripeptide transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in dipeptide transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within dipeptide transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in dipeptide transport IEA
Inferred from Electronic Annotation
more info
  
involved_in oligopeptide transport IEA
Inferred from Electronic Annotation
more info
  
involved_in peptide transport IEA
Inferred from Electronic Annotation
more info
  
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within proton transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within tripeptide transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in tripeptide transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
dipeptide/tripeptide:H(+) symporter DtpB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3640862..3642331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417953.1 dipeptide/tripeptide:H(+) symporter DtpB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417953.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2W6PI43, A0A6N8R1L8, A0A895P0Z6
    Conserved Domains (1) summary
    PRK10207
    Location:1 → 489
    PRK10207; dipeptide/tripeptide permease DtpB
Nucleotide Protein
Heading Accession and Version

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