U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dppC dipeptide ABC transporter membrane subunit DppC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948064, updated on 25-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
dppC
Gene description
dipeptide ABC transporter membrane subunit DppC
Primary source
ASAP:ABE-0011570
Locus tag
b3542
See related
ECOCYC:EG12626
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3529
Summary
Escherichia coli does not normally use exogeneous heme, but heme can be utilized if a foreign OM heme receptor is expressed in Escherichia coli (Letoffe, 2006). [More information is available at EcoGene: EG12626]. DppC is an integral membrane component of the dipeptide ABC transporter. [More information is available at EcoCyc: EG12626].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (3703859..3704761, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative transporter YhjV Neighboring gene dipeptide ABC transporter ATP binding subunit DppF Neighboring gene dipeptide ABC transporter ATP binding subunit DppD Neighboring gene dipeptide ABC transporter membrane subunit DppB Neighboring gene dipeptide ABC transporter periplasmic binding protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. PEPTIDE UTILIZATION IN ESCHERICHIA COLI. GILVARG C, et al. J Biol Chem, 1965 Jul. PMID 14342337
  2. Structural basis for recognition of dipeptides by peptide transporters. Payne JW, et al. Arch Biochem Biophys, 2000 Dec 1. PMID 11147841
  3. Crystal structure of the dipeptide binding protein from Escherichia coli involved in active transport and chemotaxis. Dunten P, et al. Protein Sci, 1995 Nov. PMID 8563629, Free PMC Article
  4. 2 A resolution structure of DppA, a periplasmic dipeptide transport/chemosensory receptor. Nickitenko AV, et al. Biochemistry, 1995 Dec 26. PMID 8527431
  5. Crystallization and preliminary X-ray analysis of the periplasmic dipeptide binding protein from Escherichia coli. Dunten PW, et al. J Mol Biol, 1993 May 5. PMID 8496961

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables dipeptide transmembrane transporter activity RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within dipeptide transmembrane transport RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
involved_in dipeptide transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in heme transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in peptide transport IEA
Inferred from Electronic Annotation
more info
  
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
dipeptide ABC transporter membrane subunit DppC
NP_417999.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3703859..3704761 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417999.1 dipeptide ABC transporter membrane subunit DppC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417999.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6M9QKV4
    Conserved Domains (1) summary
    PRK10913
    Location:1 → 300
    PRK10913; dipeptide ABC transporter permease DppC
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.