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xanP xanthine:H(+) symporter XanP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948172, updated on 11-Apr-2024

Summary

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Gene symbol
xanP
Gene description
xanthine:H(+) symporter XanP
Primary source
ASAP:ABE-0011946
Locus tag
b3654
See related
ECOCYC:EG11194
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3644; yicE
Summary
xanP is predicted to belong to the PurR regulon. [More information is available at EcoGene: EG11194]. The YicE protein is a member of the NCS2 family of nucleobase transporters. [More information is available at EcoCyc: EG11194].
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Genomic context

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Sequence:
NC_000913.3 (3828945..3830336)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA helicase RecG Neighboring gene glutamate:sodium symporter Neighboring gene AsmA family protein YicH Neighboring gene alpha-D-xyloside xylohydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transport of nucleic acid bases into Escherichia coli. Burton K. J Gen Microbiol, 1983 Nov. PMID 6198438
  2. Cloning and functional characterization of two bacterial members of the NAT/NCS2 family in Escherichia coli. Karatza P, et al. Mol Membr Biol, 2005 May-Jun. PMID 16096267
  3. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
  4. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Qin ZS, et al. Nat Biotechnol, 2003 Apr. PMID 12627170
  5. Factors influencing the identification of transcription factor binding sites by cross-species comparison. McCue LA, et al. Genome Res, 2002 Oct. PMID 12368244, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables nucleobase transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables xanthine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables xanthine transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in xanthine transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within xanthine transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
xanthine:H(+) symporter XanP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3828945..3830336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418111.1 xanthine:H(+) symporter XanP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418111.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7YFR8
    Conserved Domains (1) summary
    TIGR00801
    Location:29 → 457
    ncs2; uracil-xanthine permease
Nucleotide Protein
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