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atpH ATP synthase F1 complex subunit delta [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948254, updated on 4-Apr-2024

Summary

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Gene symbol
atpH
Gene description
ATP synthase F1 complex subunit delta
Primary source
ASAP:ABE-0012215
Locus tag
b3735
See related
ECOCYC:EG10105
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3728; papE; uncH
Summary
The delta subunit is required for binding the F-1 complex to the F-O complex. [More information is available at EcoCyc: EG10105].
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Genomic context

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Sequence:
NC_000913.3 (3919870..3920403, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ATP synthase F1 complex subunit gamma Neighboring gene ATP synthase F1 complex subunit alpha Neighboring gene ATP synthase Fo complex subunit b Neighboring gene ATP synthase Fo complex subunit c

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Localization of the delta subunit in the Escherichia coli F(1)F(0)-ATPsynthase by immuno electron microscopy: the delta subunit binds on top of the F(1). Wilkens S, et al. J Mol Biol, 2000 Jan 21. PMID 10623533
  2. Solution structure of the N-terminal domain of the delta subunit of the E. coli ATPsynthase. Wilkens S, et al. Nat Struct Biol, 1997 Mar. PMID 9164460
  3. Role of the delta subunit in enhancing proton conduction through the F0 of the Escherichia coli F1F0 ATPase. Monticello RA, et al. J Bacteriol, 1994 Mar. PMID 8113178, Free PMC Article
  4. Unisite catalysis and the delta subunit of F1-ATPase in Escherichia coli. Xiao R, et al. J Biol Chem, 1994 Jul 29. PMID 8034684
  5. Escherichia coli mutants defective in the uncH gene. Humbert R, et al. J Bacteriol, 1983 Jan. PMID 6294057, Free PMC Article

See all (60) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. During assembly of ATP synthase, alpha/delta subunit interaction is an important facet of proton pumping stator subunit structure and function.
    Title: Assembly of the stator in Escherichia coli ATP synthase. Complexation of alpha subunit with other F1 subunits is prerequisite for delta subunit binding to the N-terminal region of alpha.
  2. N-terminus verified by Edman degradation on mature peptide
    Title: Solution structure of the N-terminal domain of the delta subunit of the E. coli ATPsynthase.
  3. subunit b dimer of the FOF1-ATP synthase interacts with F1-ATPase
    Title: The subunit b dimer of the FOF1-ATP synthase: interaction with F1-ATPase as deduced by site-specific spin-labeling.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
contributes_to proton-transporting ATP synthase activity, rotational mechanism IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to proton-transporting ATP synthase activity, rotational mechanism IDA
Inferred from Direct Assay
more info
 PubMed 
enables proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
  
enables proton-transporting ATP synthase activity, rotational mechanism IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
involved_in proton motive force-driven ATP synthesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
  
involved_in proton motive force-driven plasma membrane ATP synthesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane NAS
Non-traceable Author Statement
more info
 PubMed 
part_of proton-transporting ATP synthase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
part_of proton-transporting ATP synthase complex, catalytic core F(1) IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
Inferred from Electronic Annotation
more info
  
part_of proton-transporting ATP synthase complex, catalytic core F(1) IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase F1 complex subunit delta
NP_418191.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3919870..3920403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418191.1 ATP synthase F1 complex subunit delta [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418191.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A418GQ95
    Conserved Domains (1) summary
    PRK05758
    Location:1 → 177
    PRK05758; F0F1 ATP synthase subunit delta; Validated
Nucleotide Protein
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Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials