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rffG dTDP-glucose 4,6-dehydratase 2 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948300, updated on 23-Nov-2023

Summary

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Gene symbol
rffG
Gene description
dTDP-glucose 4,6-dehydratase 2
Primary source
ASAP:ABE-0012376
Locus tag
b3788
See related
ECOCYC:EG11453
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3780; rff
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Genomic context

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Sequence:
NC_000913.3 (3972522..3973589)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene enterobacterial common antigen polysaccharide co-polymerase Neighboring gene UDP-N-acetylglucosamine 2-epimerase Neighboring gene UDP-N-acetyl-D-mannosamine dehydrogenase Neighboring gene glucose-1-phosphate thymidylyltransferase 2 Neighboring gene RffC Neighboring gene dTDP-4-dehydro-6-deoxy-D-glucose transaminase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. THYMIDINE DIPHOSPHATE 4-ACETAMIDO-4,6-DIDEOXYHEXOSES. II. PURIFICATION AND PROPERTIES OF THYMIDINE DIPHOSPHATE D-GLUCOSE OXIDOREDUCTASE. GILBERT JM, et al. J Biol Chem, 1965 Mar. PMID 14284740
  2. Characterization of enzymatic processes by rapid mix-quench mass spectrometry: the case of dTDP-glucose 4,6-dehydratase. Gross JW, et al. Biochemistry, 2000 Nov 14. PMID 11076501
  3. Genetic analysis of the dTDP-rhamnose biosynthesis region of the Escherichia coli VW187 (O7:K1) rfb gene cluster: identification of functional homologs of rfbB and rfbA in the rff cluster and correct location of the rffE gene. Marolda CL, et al. J Bacteriol, 1995 Oct. PMID 7559340, Free PMC Article
  4. Genetic location of genes encoding enterobacterial common antigen. Meier U, et al. J Bacteriol, 1985 Aug. PMID 3894334, Free PMC Article
  5. The SWISS-PROT protein sequence data bank, recent developments. Bairoch A, et al. Nucleic Acids Res, 1993 Jul 1. PMID 8332529, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables dTDP-glucose 4,6-dehydratase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables dTDP-glucose 4,6-dehydratase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables dTDP-glucose 4,6-dehydratase activity IEA
Inferred from Electronic Annotation
more info
  
enables lyase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in enterobacterial common antigen biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in extracellular polysaccharide biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in lipopolysaccharide biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in nucleotide-sugar metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
dTDP-glucose 4,6-dehydratase 2
YP_026255.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3972522..3973589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_026255.1 dTDP-glucose 4,6-dehydratase 2 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_026255.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6N8QEA8
    Conserved Domains (1) summary
    PRK10217
    Location:1 → 355
    PRK10217; dTDP-glucose 4,6-dehydratase; Provisional
Nucleotide Protein
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