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yihX alpha-D-glucose-1-phosphate phosphatase YihX [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948380, updated on 11-Apr-2024

Summary

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Gene symbol
yihX
Gene description
alpha-D-glucose-1-phosphate phosphatase YihX
Primary source
ASAP:ABE-0012686
Locus tag
b3885
See related
ECOCYC:EG11850
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3878
Summary
HAD superfamily. [More information is available at EcoGene: EG11850]. YihX is a phosphatase belonging to the superfamily of haloacid dehalogenase (HAD)-like hydrolases. [More information is available at EcoCyc: EG11850].
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Genomic context

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Sequence:
NC_000913.3 (4075553..4076152)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 6-deoxy-6-sulfofructose kinase Neighboring gene DNA-binding transcriptional dual regulator CsqR Neighboring gene PF03631 family membrane protein YihY Neighboring gene D-aminoacyl-tRNA deacylase Neighboring gene putative fatty acid biosynthesis enzyme FabY Neighboring gene putative DNA-binding transcriptional regulator YiiE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
  2. Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Rooney JP, et al. Genomics, 2009 Jan. PMID 18824089, Free PMC Article
  3. Enzyme genomics: Application of general enzymatic screens to discover new enzymes. Kuznetsova E, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808744
  4. Genome-wide analysis of substrate specificities of the Escherichia coli haloacid dehalogenase-like phosphatase family. Kuznetsova E, et al. J Biol Chem, 2006 Nov 24. PMID 16990279
  5. Computer analysis of bacterial haloacid dehalogenases defines a large superfamily of hydrolases with diverse specificity. Application of an iterative approach to database search. Koonin EV, et al. J Mol Biol, 1994 Nov 18. PMID 7966317

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables glucose-1-phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables glucose-1-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables magnesium ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables manganese ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
alpha-D-glucose-1-phosphate phosphatase YihX
NP_418321.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4075553..4076152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418321.4 alpha-D-glucose-1-phosphate phosphatase YihX [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418321.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A827Y0E6
    Conserved Domains (1) summary
    PRK09456
    Location:1 → 199
    PRK09456; ?-D-glucose-1-phosphatase; Provisional
Nucleotide Protein
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