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yihV 6-deoxy-6-sulfofructose kinase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948382, updated on 2-May-2024

Summary

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Gene symbol
yihV
Gene description
6-deoxy-6-sulfofructose kinase
Primary source
ASAP:ABE-0012681
Locus tag
b3883
See related
ECOCYC:EG11848
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3876; squV
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Genomic context

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Sequence:
NC_000913.3 (4073739..4074635)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 6-deoxy-6-sulfofructose-1-phosphate aldolase Neighboring gene 3-sulfolactaldehyde reductase Neighboring gene DNA-binding transcriptional dual regulator CsqR Neighboring gene alpha-D-glucose-1-phosphate phosphatase YihX Neighboring gene PF03631 family membrane protein YihY

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sulphoglycolysis in Escherichia coli K-12 closes a gap in the biogeochemical sulphur cycle. Denger K, et al. Nature, 2014 Mar 6. PMID 24463506
  2. Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli. Tavazoie S, et al. Nat Biotechnol, 1998 Jun. PMID 9624689
  3. Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence. Gibson DL, et al. J Bacteriol, 2006 Nov. PMID 17079680, Free PMC Article
  4. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
  5. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 6-deoxy-6-sulfofructose kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables 6-deoxy-6-sulfofructose kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity, transferring phosphorus-containing groups IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in 6-sulfoquinovose(1-) catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within 6-sulfoquinovose(1-) catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within 6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within carbohydrate phosphorylation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in phosphate-containing compound metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
6-deoxy-6-sulfofructose kinase
NP_418319.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4073739..4074635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418319.2 6-deoxy-6-sulfofructose kinase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418319.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X3J9L5, E1IUE4, F4VLS5
    Conserved Domains (1) summary
    cd01945
    Location:3 → 286
    ribokinase_group_B; Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .
Nucleotide Protein
Heading Accession and Version

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