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argE acetylornithine deacetylase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948456, updated on 11-Apr-2024

Summary

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Gene symbol
argE
Gene description
acetylornithine deacetylase
Primary source
ASAP:ABE-0012955
Locus tag
b3957
See related
ECOCYC:EG11286
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3948
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Genomic context

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Sequence:
NC_000913.3 (4153696..4154847, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene phosphoethanolamine transferase EptC Neighboring gene phosphoenolpyruvate carboxylase Neighboring gene N-acetylglutamylphosphate reductase Neighboring gene acetylglutamate kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural characterization of Zn(II)-, Co(II)-, and Mn(II)-loaded forms of the argE-encoded N-acetyl-L-ornithine deacetylase from Escherichia coli. Tao Y, et al. J Inorg Biochem, 2012 Jun. PMID 22459917, Free PMC Article
  2. [Studies on the expression, purification and renaturation of recombinant N-acety-L-ornithine deacetylase]. Li H, et al. Sheng Wu Gong Cheng Xue Bao, 2007 May. PMID 17577999
  3. Characterization of the catalytically active Mn(II)-loaded argE-encoded N-acetyl-L-ornithine deacetylase from Escherichia coli. McGregor WC, et al. J Biol Inorg Chem, 2007 Jun. PMID 17333302
  4. argE-encoded N-acetyl-L-ornithine deacetylase from Escherichia coli contains a dinuclear metalloactive site. McGregor WC, et al. J Am Chem Soc, 2005 Oct 12. PMID 16201833
  5. Mechanistic analysis of the argE-encoded N-acetylornithine deacetylase. Javid-Majd F, et al. Biochemistry, 2000 Feb 15. PMID 10684608

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data suggest the Zn(II), Co(II), and Mn(II) bind to N-acetyl-l-ornithine deacetylase (ArgE) in a cooperative manner.
    Title: Structural characterization of Zn(II)-, Co(II)-, and Mn(II)-loaded forms of the argE-encoded N-acetyl-L-ornithine deacetylase from Escherichia coli.
  2. Data show that most N-acety-L-ornithine deacetylase(NAOase) was expressed as inclusion bodies.
    Title: [Studies on the expression, purification and renaturation of recombinant N-acety-L-ornithine deacetylase].
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables acetylornithine deacetylase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables acetylornithine deacetylase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables acetylornithine deacetylase activity IEA
Inferred from Electronic Annotation
more info
  
enables cobalt ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in arginine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within arginine biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in arginine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acetylornithine deacetylase
NP_418392.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4153696..4154847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418392.1 acetylornithine deacetylase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418392.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6L7A061, A0A6N0IJW8, A0A8S7EQ97
    Conserved Domains (1) summary
    PRK05111
    Location:2 → 383
    PRK05111; acetylornithine deacetylase; Provisional
Nucleotide Protein
Heading Accession and Version

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