U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fdnH formate dehydrogenase N subunit beta [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948794, updated on 4-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
fdnH
Gene description
formate dehydrogenase N subunit beta
Primary source
ASAP:ABE-0004919
Locus tag
b1475
See related
ECOCYC:EG11228
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1469
Summary
FdnH is co-exported bound to Tat substrate FdnG. [More information is available at EcoGene: EG11228]. FdnH contains four [4Fe-4S] clusters and one C-terminal transmembrane helix . [More information is available at EcoCyc: EG11228].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1550461..1551345)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene amino acid exporter YddG Neighboring gene formate dehydrogenase N subunit alpha Neighboring gene formate dehydrogenase N subunit gamma Neighboring gene DNA-binding transcriptional regulator YddM Neighboring gene ethanol dehydrogenase/alcohol dehydrogenase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Escherichia coli formate dehydrogenase mutants with altered selenopolymer profiles. Cox JC. Arch Microbiol, 1989. PMID 2684082
  2. Purification and crystallization of the respiratory complex formate dehydrogenase-N from Escherichia coli. Jormakka M, et al. Acta Crystallogr D Biol Crystallogr, 2002 Jan. PMID 11752799
  3. Localization of upstream sequence elements required for nitrate and anaerobic induction of fdn (formate dehydrogenase-N) operon expression in Escherichia coli K-12. Li J, et al. J Bacteriol, 1992 Aug. PMID 1629153, Free PMC Article
  4. The purification and properties of formate dehydrogenase and nitrate reductase from Escherichia coli. Enoch HG, et al. J Biol Chem, 1975 Sep 10. PMID 1099093
  5. Recognition of the mRNA selenocysteine insertion sequence by the specialized translational elongation factor SELB. Ringquist S, et al. Genes Dev, 1994 Feb 1. PMID 8314089

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables electron transfer activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables formate dehydrogenase (quinone) activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in anaerobic electron transport chain NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within anaerobic respiration IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in cellular respiration IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within formate oxidation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in formate oxidation IEA
Inferred from Electronic Annotation
more info
  
involved_in formate oxidation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in heme oxidation NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of formate dehydrogenase complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of formate dehydrogenase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in membrane HDA PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
formate dehydrogenase N subunit beta
NP_415992.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1550461..1551345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415992.1 formate dehydrogenase N subunit beta [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415992.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2H4U051, A0A6C9QFE0, A0A7D7HGG7
    Conserved Domains (1) summary
    TIGR01582
    Location:7 → 290
    FDH-beta; formate dehydrogenase, beta subunit, Fe-S containing
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.