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idnT L-idonate/5-ketogluconate/gluconate transporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948798, updated on 11-Apr-2024

Summary

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Gene symbol
idnT
Gene description
L-idonate/5-ketogluconate/gluconate transporter
Primary source
ASAP:ABE-0013969
Locus tag
b4265
See related
ECOCYC:EG12539
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4258; gntW; yjgT
Summary
IT (Ion Transporter) superfamily (Prakash, 2003). [More information is available at EcoGene: EG12539]. IdnT is a probable L-idonate and D-gluconate transporter. [More information is available at EcoCyc: EG12539].
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Genomic context

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Sequence:
NC_000913.3 (4491206..4492525, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF853 domain-containing protein YjgR Neighboring gene DNA-binding transcriptional dual regulator IdnR Neighboring gene 5-keto-D-gluconate 5-reductase Neighboring gene L-idonate 5-dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The mechanism of maintenance of electroneutrality during the transport of gluconate by E. coli. Robin A, et al. FEBS Lett, 1973 Oct 15. PMID 4585187
  2. Transcriptional organization and regulation of the L-idonic acid pathway (GntII system) in Escherichia coli. Bausch C, et al. J Bacteriol, 2004 Mar. PMID 14973046, Free PMC Article
  3. Sequence analysis of the GntII (subsidiary) system for gluconate metabolism reveals a novel pathway for L-idonic acid catabolism in Escherichia coli. Bausch C, et al. J Bacteriol, 1998 Jul. PMID 9658018, Free PMC Article
  4. Domain structure and pore loops in the 2-hydroxycarboxylate transporter family. Lolkema JS. J Mol Microbiol Biotechnol, 2006. PMID 17114896
  5. Sequence and hydropathy profile analysis of two classes of secondary transporters. Lolkema JS, et al. Mol Membr Biol, 2005 May-Jun. PMID 16096261

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables L-idonate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables L-idonate transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables gluconate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables gluconate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables gluconate transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-gluconate metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in L-idonate catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in L-idonate transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within L-idonate transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within carbohydrate transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in gluconate transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in gluconate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in organic substance transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
L-idonate/5-ketogluconate/gluconate transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4491206..4492525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418686.1 L-idonate/5-ketogluconate/gluconate transporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418686.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7F2H8
    Conserved Domains (1) summary
    TIGR00791
    Location:1 → 438
    gntP; gluconate transporter
Nucleotide Protein
Heading Accession and Version

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