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lgoT galactonate:H(+) symporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948879, updated on 11-Apr-2024

Summary

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Gene symbol
lgoT
Gene description
galactonate:H(+) symporter
Primary source
ASAP:ABE-0014284
Locus tag
b4356
See related
ECOCYC:EG12587
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4346; yjiZ; yjjL
Summary
Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG12588]. The YjjL protein is a member of the major facilitator superfamily (MFS) of transporters . [More information is available at EcoCyc: EG12587].
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Genomic context

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Sequence:
NC_000913.3 (4593361..4594722, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pyruvate:H(+) symporter Neighboring gene methyl-accepting chemotaxis protein Tsr Neighboring gene putative DNA-binding transcriptional regulator LgoR Neighboring gene L-galactonate oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The pathway for L-galactonate catabolism in Escherichia coli K-12. Cooper RA. FEBS Lett, 1979 Jul 15. PMID 381020
  2. Systems approach to refining genome annotation. Reed JL, et al. Proc Natl Acad Sci U S A, 2006 Nov 14. PMID 17088549, Free PMC Article
  3. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212
  4. The major facilitator superfamily. Saier MH Jr, et al. J Mol Microbiol Biotechnol, 1999 Nov. PMID 10943556
  5. A major superfamily of transmembrane facilitators that catalyse uniport, symport and antiport. Marger MD, et al. Trends Biochem Sci, 1993 Jan. PMID 8438231

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within aldonate transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in organic substance transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
galactonate:H(+) symporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4593361..4594722 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418776.1 galactonate:H(+) symporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418776.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AA87JYH6
    Conserved Domains (1) summary
    cd17319
    Location:44 → 442
    MFS_ExuT_GudP_like; Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily
Nucleotide Protein
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