Molecular analysis of the 5'-flanking region of the neurofibromatosis type 1 (NF1) gene: identification of five sequence variants

Clin Genet. 2000 Mar;57(3):221-4. doi: 10.1034/j.1399-0004.2000.570308.x.

Abstract

Dideoxy fingerprinting was used to analyse the 5' flanking region of the neurofibromin (NF1) gene in a panel of 380 neurofibromatosis type 1 (NF1) patients. Five polymorphisms/rare variants were identified at positions -412, - 402, + 16, + 25 and + 132, but control data indicated that these were unlikely to be of pathological significance. Promoter mutations in the NF1 gene are not, therefore, a common cause of NF1. This notwithstanding, a reporter gene assay was performed to determine if these variants could affect the expression of the NF1 gene, and all three changes in the 5'-untranslated region (UTR) (+ 16, + 25, + 132) were found to be associated with a 60-70% increase in reporter gene expression.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Fingerprinting
  • DNA Mutational Analysis
  • Genes, Neurofibromatosis 1 / genetics*
  • HeLa Cells
  • Humans
  • Luciferases / metabolism
  • Neurofibromatosis 1 / genetics*
  • Plasmids
  • Polymerase Chain Reaction
  • Polymorphism, Genetic
  • Promoter Regions, Genetic
  • Transfection

Substances

  • Luciferases