Gene amplification at chromosome 1pter-p33 including the genes PAX7 and ENO1 in squamous cell lung carcinoma

Int J Oncol. 2000 Jul;17(1):67-73. doi: 10.3892/ijo.17.1.67.

Abstract

Gene amplification is a frequent event in lung cancer, specifically in squamous cell lung carcinoma. Recently, we reported amplifications on chromosomal bands 3q26.1-q26.3 with the genes BCHE and SLC2A2 amplified in 40% of squamous cell lung carcinomas. Here, we identified an amplified domain within chromosomal bands 1pter-p33 in squamous cell lung carcinoma using reverse chromosome painting. A panel of nine genes which have previously been assigned to region 1pter-p33 was tested for amplification using comparative PCR. The ENO1 gene that encodes enolase and the PAX7 gene that encodes a transcription factor were most frequently amplified. Specifically, the gene ENO1 was amplified in six and the gene PAX7 in five out of 37 cases which included both biopsies and paraffin-embedded tissues of squamous cell lung carcinomas. In total, we identified amplifications of at least one gene at bands 1pter-p33 in 10 out of 37 tumors (27%). Together, our data indicate that a novel and frequent amplification unit is present in squamous cell lung carcinoma with the center of the amplified domain in the vicinity of the genes PAX7 and ENO1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carcinoma, Squamous Cell / chemistry
  • Carcinoma, Squamous Cell / genetics*
  • Carcinoma, Squamous Cell / pathology
  • Chromosome Mapping
  • Chromosome Painting
  • Chromosomes, Human, Pair 1*
  • DNA, Neoplasm / analysis
  • Gene Amplification*
  • Homeodomain Proteins / genetics*
  • Humans
  • Karyotyping
  • Lung Neoplasms / chemistry
  • Lung Neoplasms / genetics*
  • Lung Neoplasms / pathology
  • PAX7 Transcription Factor
  • Phosphopyruvate Hydratase / genetics*
  • Transcription Factors / genetics*

Substances

  • DNA, Neoplasm
  • Homeodomain Proteins
  • PAX7 Transcription Factor
  • PAX7 protein, human
  • Transcription Factors
  • Phosphopyruvate Hydratase