Site-specific DNA methylation contributes to neurotensin/neuromedin N expression in colon cancers

Am J Physiol Gastrointest Liver Physiol. 2000 Dec;279(6):G1139-47. doi: 10.1152/ajpgi.2000.279.6.G1139.

Abstract

The neurotensin/neuromedin N (NT/N) gene is expressed in fetal colon, repressed in newborn and adult colon, and reexpressed in approximately 25% of colon cancers. Our purpose was to determine the effect of gene methylation on NT/N silencing in colon cancers. We found that the NT/N gene was expressed in human colon cancer cell line KM12C but not in KM20 colon cancer cells. Bisulfite genomic sequencing demonstrated that all CpG dinucleotides in the region from -373 to +100 of the NT/N promoter, including a CpG site in a distal consensus AP-1 site, were methylated in KM20 but unmethylated in KM12C cells. Treatment of KM20 cells with demethylating agent 5-azacytidine induced NT/N expression, suggesting a role for DNA methylation in silencing of NT/N in colon cancers. To better elucidate the mechanisms responsible for NT/N repression by DNA methylation, we performed gel shift assays using an oligonucleotide probe corresponding to the distal AP-1 consensus sequence of the NT/N promoter. Methylation of the oligonucleotide probe inhibited protein binding to the distal AP-1 site of the NT/N promoter, suggesting a potential mechanism of NT/N gene repression in colon cancers. We show that DNA methylation plays a role in NT/N gene silencing in the human colon cancer KM20 and that NT/N expression in KM12C cells is associated with demethylation of the CpG sites. DNA methylation likely contributes to NT/N gene expression noted in human colon cancers.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adult
  • Base Sequence
  • Colonic Neoplasms / genetics
  • Colonic Neoplasms / metabolism*
  • Consensus Sequence
  • Cytosine / metabolism
  • DNA Methylation*
  • Electrophoresis, Polyacrylamide Gel
  • Gene Expression Regulation, Neoplastic*
  • Humans
  • Molecular Sequence Data
  • Neurotensin / biosynthesis*
  • Peptide Fragments / biosynthesis*
  • Promoter Regions, Genetic
  • Transcription Factor AP-1 / metabolism*
  • Tumor Cells, Cultured

Substances

  • Peptide Fragments
  • Transcription Factor AP-1
  • neuromedin N
  • Neurotensin
  • Cytosine