Rapid and simple phenotypic assay for drug susceptibility of human immunodeficiency virus type 1 using CCR5-expressing HeLa/CD4(+) cell clone 1-10 (MAGIC-5)

Antimicrob Agents Chemother. 2001 Feb;45(2):495-501. doi: 10.1128/AAC.45.2.495-501.2001.

Abstract

We describe a rapid and simple novel phenotypic assay for drug susceptibility of human immunodeficiency virus type-1 (HIV-1) using a CCR5-expressing HeLa/CD4(+) cell clone 1-10 (MAGIC-5). MAGIC-5 cells produced large amounts of HIV-1 in culture supernatants, which enabled us to perform the phenotypic resistance assay. Determination of HIV-1 susceptibility to various protease inhibitors (PI) and nucleoside reverse transcriptase inhibitors was completed within 15 days in T-cell-tropic (X4) and macrophage-tropic (R5) viruses using fresh plasma samples containing at least 10(4) copies/ml. The nucleotide sequence of the envelope V3 region of HIV-1 in plasma was almost identical to that of the virus isolated by MAGIC-5 cells, suggesting a lack of selection bias in our assay. The assay variability was confined to within five-fold in all drugs examined. Accordingly, we used a 10-fold increase in the 50% inhibitory concentration as the cutoff value for viral resistance in the present assay. HIV-1 resistant to lamivudine, which was not detected by conventional genotypic assays, was isolated. In HIV-1 with PI-associated primary amino acid substitutions, our assay showed that drug resistance profiles correlated well with previously reported genotypic-assay data. Furthermore, our assay provided comprehensive results regarding PI resistance in the presence of multiple mutations. The novel assay successfully quantified the level of resistance of clinical HIV-1 isolates to a battery of anti-HIV drugs, indicating its clinical usefulness, particularly in patients who failed to respond to antiretroviral chemotherapy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Anti-HIV Agents / pharmacology*
  • CD4 Antigens / genetics*
  • Clone Cells
  • Flow Cytometry
  • Genotype
  • HIV Infections / virology
  • HIV-1 / drug effects*
  • HIV-1 / genetics
  • HeLa Cells
  • Humans
  • Indicators and Reagents
  • Microbial Sensitivity Tests
  • Molecular Sequence Data
  • Mutation / genetics
  • Phenotype
  • Receptors, CCR5 / biosynthesis*
  • Receptors, CXCR4 / biosynthesis
  • Receptors, CXCR4 / genetics
  • Reverse Transcriptase Polymerase Chain Reaction

Substances

  • Anti-HIV Agents
  • CD4 Antigens
  • Indicators and Reagents
  • Receptors, CCR5
  • Receptors, CXCR4

Associated data

  • GENBANK/AB037015
  • GENBANK/AB037079