Cloning, physical mapping and structural characterization of the human alpha(A)-adaptin gene

Gene. 2002 May 1;289(1-2):191-9. doi: 10.1016/s0378-1119(02)00504-8.

Abstract

Adaptins are major structural components of heterotetrameric protein complexes called adaptors, which are involved in intracellular receptor transport via clathrin-coated vesicles. In mice, one of these adaptins has been shown to be encoded by two genes, alpha(A)-adaptin and alpha(C)-adaptin, the former of which is expressed as two alternatively spliced transcripts. Using positional cloning gene approaches, we were able to identify the human alpha(A)-adaptin gene, which consists of 24 exons spanning over 40 kb on chromosome 19q13.3 between the loci of the R-ras gene and the polynucleotide kinase phosphatase gene. The novel gene encodes a 977 amino acid, 107.6 kDa protein with 98% amino acid sequence identity to its murine ortholog. Human alpha(A)-adaptin is expressed as a full-length transcript in forebrain, skeletal muscle, spinal cord, cerebellum, salivary gland, heart and colon. It is also ubiquitously expressed in tissues and in ZR-75-1 breast cancer cells and LNCaP prostate carcinoma cells as a smaller variant generated by splicing out of an exon encoding 22 amino acids in the hinge region of the protein.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Adaptor Protein Complex 2*
  • Adaptor Protein Complex alpha Subunits
  • Alternative Splicing
  • Amino Acid Sequence
  • Base Sequence
  • Carrier Proteins / genetics*
  • Chromosomes, Human, Pair 19 / genetics
  • Cloning, Molecular
  • DNA / chemistry
  • DNA / genetics
  • Exons
  • Female
  • Gene Expression
  • Genes / genetics
  • Humans
  • Introns
  • Male
  • Membrane Proteins / genetics*
  • Molecular Sequence Data
  • Physical Chromosome Mapping
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Tumor Cells, Cultured

Substances

  • Adaptor Protein Complex 2
  • Adaptor Protein Complex alpha Subunits
  • Carrier Proteins
  • Membrane Proteins
  • adaptor protein complex 2, alpha 2 subunit
  • DNA

Associated data

  • GENBANK/AF289221