The N-terminal splice product NF1-10a-2 of the NF1 gene codes for a transmembrane segment

Biochem Biophys Res Commun. 2002 Jun 7;294(2):496-503. doi: 10.1016/S0006-291X(02)00501-6.

Abstract

One important function of the neurofibromatosis type 1 (NF1) product neurofibromin is the negative regulation of Ras activity on the cell membrane. Here, we describe an alternative splice product of the N-terminus of the NF1 gene. In this splice product, termed NF1-10a-2, the 45 bp exon 10a-2 is inserted between exons 10a and 10b. Amino acid sequence analysis for motifs showed that the new splice product contains a transmembrane segment not found in wild-type neurofibromin. The overall expression was found to be very low in comparison to the expression of the wild-type mRNA in all human primary and tumor cells examined. Because transcripts were found in the majority of human tissues examined, we assume a housekeeping function of this splice product. Investigation of the intracellular localization of an NF1-10a-2-EGFP fusion protein in HeLa cells revealed a preferential localization in perinuclear granular structures. We therefore assume that NF1-10a-2 has a function on an intracellular membrane.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing / genetics*
  • Amino Acid Motifs / physiology
  • Amino Acid Sequence
  • Base Sequence
  • Cell Membrane / metabolism*
  • Cell Nucleus / metabolism
  • Cells, Cultured
  • Exons / genetics
  • Humans
  • Luminescent Proteins / genetics
  • Molecular Sequence Data
  • Neurofibromatosis 1 / genetics*
  • Neurofibromatosis 1 / metabolism
  • Organ Specificity
  • Protein Isoforms / biosynthesis
  • Protein Isoforms / genetics
  • Protein Structure, Secondary
  • RNA, Messenger / biosynthesis
  • Recombinant Fusion Proteins / biosynthesis
  • Recombinant Fusion Proteins / genetics
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Analysis, Protein
  • Transfection
  • Tumor Cells, Cultured

Substances

  • Luminescent Proteins
  • Protein Isoforms
  • RNA, Messenger
  • Recombinant Fusion Proteins