A novel polymorphism of the human APRIL gene is associated with systemic lupus erythematosus

Rheumatology (Oxford). 2003 Aug;42(8):980-5. doi: 10.1093/rheumatology/keg270. Epub 2003 Mar 31.

Abstract

Objective: We investigated the association of gene polymorphisms in APRIL, a new member of the TNF family, with systemic lupus erythematosus.

Methods: To detect polymorphisms of the human APRIL gene by exon-specific polymerase chain reaction-single-strand conformation polymorphism (PCR-SSCP) analysis, we first determined the structure of the human APRIL gene. We designed exon-specific oligonucleotide primers according to the genomic DNA sequence of APRIL. All of the coding regions in exons of the APRIL gene were analysed by exon-specific PCR-SSCP in 148 SLE patients and 146 unaffected controls, then the nucleotide sequences of exons that displayed aberrant bands were determined.

Results: The human APRIL gene comprised at least six exons with five introns, spanning approximately 2.8 kilobases of the genomic DNA. By exon-specific PCR-SSCP, we identified two novel polymorphisms at codons 67 and 96. Both had amino acid substitutions: G67R and N96S respectively. Only the 67G allele was associated with SLE in 148 Japanese SLE patients, with allele frequency 0.662 compared with 0.575 for 146 unaffected controls (P=0.0302). The frequency of the individuals who possessed at least one 67G allele in SLE patients (91.9%) was significantly higher than that in the unaffected controls (80.1%) (P=0.0036).

Conclusion: The 67G allele of APRIL may be a contributing factor in the pathogenesis of SLE.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Alleles
  • Case-Control Studies
  • Chi-Square Distribution
  • Female
  • Gene Frequency
  • Humans
  • Linkage Disequilibrium
  • Lupus Erythematosus, Systemic / genetics*
  • Male
  • Middle Aged
  • Neuropeptides / genetics*
  • Nuclear Proteins / genetics*
  • Polymorphism, Genetic*
  • Polymorphism, Single-Stranded Conformational

Substances

  • ANP32B protein, human
  • Neuropeptides
  • Nuclear Proteins