Mutations and aberrant DNA methylation of the PROX1 gene in hematologic malignancies

Genes Chromosomes Cancer. 2003 Sep;38(1):13-21. doi: 10.1002/gcc.10248.

Abstract

The homeobox gene PROX1 is related to the Drosophila prospero gene, which is expressed in the developing central nervous system and lens-secreting cone cells. We found that the PROX1 gene had missense and nonsense mutations in 4 of 29 hematologic cell lines analyzed. Decreased mRNA expression was also observed in half of these cell lines by RT-PCR. The restoration of PROX1 gene expression after treatment with the demethylating agent 5-aza-2'-deoxycytidine, as well as bisulfite sequencing analysis, indicated that gene silencing is caused by DNA hypermethylation at intron 1. Such hypermethylation was also seen in primary lymphomas (56.3%, 18/32) in a tumor-specific manner. These findings indicate that the profile of the PROX1 gene corresponds to that of a candidate tumor-suppressor gene.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Azacitidine / pharmacology
  • Base Sequence
  • CpG Islands / genetics
  • DNA Methylation*
  • Exons / genetics
  • Gene Expression Regulation, Neoplastic / drug effects
  • Gene Expression Regulation, Neoplastic / genetics
  • HL-60 Cells
  • Hematologic Neoplasms / genetics*
  • Hematologic Neoplasms / metabolism
  • Hematologic Neoplasms / pathology
  • Homeodomain Proteins / genetics*
  • Homeodomain Proteins / metabolism*
  • Humans
  • Introns / genetics
  • Jurkat Cells
  • K562 Cells
  • Lymph Nodes / metabolism
  • Lymph Nodes / pathology
  • Molecular Sequence Data
  • Mutation*
  • Polymerase Chain Reaction
  • Sulfites / metabolism
  • Tumor Cells, Cultured
  • Tumor Suppressor Proteins
  • U937 Cells

Substances

  • Homeodomain Proteins
  • Sulfites
  • Tumor Suppressor Proteins
  • prospero-related homeobox 1 protein
  • Azacitidine
  • hydrogen sulfite