A kinetic model of the cyclin E/Cdk2 developmental timer in Xenopus laevis embryos

Biophys Chem. 2003 Jul 1;104(3):573-89. doi: 10.1016/s0301-4622(03)00060-7.

Abstract

Early cell cycles of Xenopus laevis embryos are characterized by rapid oscillations in the activity of two cyclin-dependent kinases. Cdk1 activity peaks at mitosis, driven by periodic degradation of cyclins A and B. In contrast, Cdk2 activity oscillates twice per cell cycle, despite a constant level of its partner, cyclin E. Cyclin E degrades at a fixed time after fertilization, normally corresponding to the midblastula transition. Based on published data and new experiments, we constructed a mathematical model in which: (1) oscillations in Cdk2 activity depend upon changes in phosphorylation, (2) Cdk2 participates in a negative feedback loop with the inhibitory kinase Wee1; (3) cyclin E is cooperatively removed from the oscillatory system; and (4) removed cyclin E is degraded by a pathway activated by cyclin E/Cdk2 itself. The model's predictions about embryos injected with Xic1, a stoichiometric inhibitor of cyclin E/Cdk2, were experimentally validated.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Algorithms
  • Amanitins / pharmacology
  • Animals
  • Biological Clocks / physiology
  • Blastula / physiology
  • Blotting, Western
  • CDC2-CDC28 Kinases / genetics
  • CDC2-CDC28 Kinases / metabolism*
  • Cell Cycle / physiology
  • Cell Cycle Proteins / metabolism
  • Cell Cycle Proteins / pharmacology
  • Cell Cycle Proteins / physiology
  • Checkpoint Kinase 1
  • Computational Biology
  • Cyclin E / genetics
  • Cyclin E / metabolism*
  • Cyclin-Dependent Kinase 2
  • Cyclin-Dependent Kinase Inhibitor p27
  • Embryo, Nonmammalian / metabolism
  • Embryonic Development
  • Feedback, Physiological / physiology
  • Kinetics
  • Models, Biological*
  • Models, Theoretical
  • Nuclear Proteins*
  • Phosphorylation
  • Protein Kinases / genetics
  • Protein Kinases / metabolism
  • Protein-Tyrosine Kinases / metabolism
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Transcription, Genetic / drug effects
  • Tumor Suppressor Proteins / pharmacology
  • Tumor Suppressor Proteins / physiology
  • Xenopus Proteins
  • Xenopus laevis / embryology*
  • Xenopus laevis / genetics
  • cdc25 Phosphatases / metabolism

Substances

  • Amanitins
  • Cell Cycle Proteins
  • Cyclin E
  • Nuclear Proteins
  • RNA, Messenger
  • Tumor Suppressor Proteins
  • Xenopus Proteins
  • Xicl protein, Xenopus
  • Cyclin-Dependent Kinase Inhibitor p27
  • Protein Kinases
  • WEE1 protein, Xenopus
  • Protein-Tyrosine Kinases
  • Checkpoint Kinase 1
  • CDC2-CDC28 Kinases
  • Cdk2 protein, Xenopus
  • Cyclin-Dependent Kinase 2
  • cdc25 Phosphatases