A proteomic study of SUMO-2 target proteins

J Biol Chem. 2004 Aug 6;279(32):33791-8. doi: 10.1074/jbc.M404201200. Epub 2004 Jun 2.

Abstract

The SUMO family in vertebrates includes at least three distinct proteins (SUMO-1, -2, and -3) that are added as post-translational modifications to target proteins. A considerable number of SUMO-1 target proteins have been identified, but little is known about SUMO-2. A stable HeLa cell line expressing His6-tagged SUMO-2 was established and used to label and purify novel endogenous SUMO-2 target proteins. Tagged forms of SUMO-2 were functional and localized predominantly in the nucleus. His6-tagged SUMO-2 conjugates were affinity-purified from nuclear fractions and identified by mass spectrometry. Eight novel potential SUMO-2 target proteins were identified by at least two peptides. Three of these proteins, SART1, heterogeneous nuclear ribonucleoprotein (RNP) M, and the U5 small nuclear RNP 200-kDa helicase, play a role in RNA metabolism. SART1 and heterogeneous nuclear RNP M were both shown to be genuine SUMO targets, confirming the validity of the approach.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antigens, Neoplasm / metabolism
  • Bacterial Proteins / genetics
  • Cell Nucleus / chemistry
  • Chromatography, High Pressure Liquid
  • Gene Expression
  • HeLa Cells
  • Heterogeneous-Nuclear Ribonucleoprotein Group M / metabolism
  • Humans
  • Luminescent Proteins / genetics
  • Mass Spectrometry
  • Microscopy, Fluorescence
  • Protein Processing, Post-Translational
  • Proteomics*
  • Receptors, N-Acetylglucosamine / metabolism
  • Recombinant Fusion Proteins
  • Ribonucleoprotein, U5 Small Nuclear / metabolism
  • Ribonucleoproteins, Small Nuclear / metabolism
  • Small Ubiquitin-Related Modifier Proteins / analysis
  • Small Ubiquitin-Related Modifier Proteins / genetics
  • Small Ubiquitin-Related Modifier Proteins / metabolism*
  • Transfection
  • Trypsin / metabolism

Substances

  • Antigens, Neoplasm
  • Bacterial Proteins
  • HNRNPM protein, human
  • Heterogeneous-Nuclear Ribonucleoprotein Group M
  • Luminescent Proteins
  • Receptors, N-Acetylglucosamine
  • Recombinant Fusion Proteins
  • Ribonucleoprotein, U5 Small Nuclear
  • Ribonucleoproteins, Small Nuclear
  • SART1 protein, human
  • Small Ubiquitin-Related Modifier Proteins
  • yellow fluorescent protein, Bacteria
  • Trypsin