Differential gene expression of blood-derived cell lines in familial combined hyperlipidemia

Arterioscler Thromb Vasc Biol. 2004 Nov;24(11):2149-54. doi: 10.1161/01.ATV.0000145978.70872.63. Epub 2004 Sep 23.

Abstract

Objectives: The genetic background of familial combined hyperlipidemia (FCHL) is currently unclear. We propose transcriptional profiling as a complementary tool for its understanding. Two hypotheses were tested: the existence of a disease-specific modification of gene expression in FCHL and the detectability of such a transcriptional profile in blood derived cell lines.

Methods and results: We established lymphoblastic cell lines from FCHL patients and controls. The cells were cultured in fixed conditions and their basal expression profile was compared using microarrays; 166 genes were differentially expressed in FCHL-derived cell lines compared with controls, with enrichment in metabolism-related genes. Of note was the upregulation of EGR-1, previously found to be upregulated in the adipose tissue of FCHL patients, the upregulation of DCHR-7, the downregulation of LYPLA2, and the differential expression of several genes previously unrelated to FCHL. A cluster of potential EGR-1-regulated transcripts was also differentially expressed in FCHL cells.

Conclusions: Our data indicate that in FCHL, a disease-specific transcription profile is detectable in immortalized cell lines easily obtained from peripheral blood and provide complementary information to classical genetic approaches to FCHL and/or the metabolic syndrome.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.
  • Validation Study

MeSH terms

  • Cells, Cultured
  • Cluster Analysis
  • DNA-Binding Proteins / genetics
  • Early Growth Response Protein 1
  • Female
  • Gene Expression Profiling / methods*
  • Gene Expression Profiling / statistics & numerical data
  • Gene Expression Regulation / genetics
  • Genes / genetics
  • Humans
  • Hyperlipidemia, Familial Combined / genetics*
  • Hyperlipidemia, Familial Combined / pathology
  • Immediate-Early Proteins / genetics
  • Lymphocytes / chemistry
  • Lymphocytes / cytology
  • Lymphocytes / metabolism
  • Male
  • Middle Aged
  • Oligonucleotide Array Sequence Analysis / methods*
  • Oligonucleotide Array Sequence Analysis / statistics & numerical data
  • RNA / blood
  • Reverse Transcriptase Polymerase Chain Reaction / methods
  • Transcription Factors / genetics

Substances

  • DNA-Binding Proteins
  • EGR1 protein, human
  • Early Growth Response Protein 1
  • Immediate-Early Proteins
  • Transcription Factors
  • RNA