CALM-AF10+ T-ALL expression profiles are characterized by overexpression of HOXA and BMI1 oncogenes

Leukemia. 2005 Nov;19(11):1948-57. doi: 10.1038/sj.leu.2403891.

Abstract

The t(10;11)(p13;q14-21) is found in T-ALL and acute myeloid leukemia and fuses CALM (Clathrin-Assembly protein-like Lymphoid-Myeloid leukaemia gene) to AF10. In order to gain insight into the transcriptional consequences of this fusion, microarray-based comparison of CALM-AF10+ vs CALM-AF10- T-ALL was performed. This analysis showed upregulation of HOXA5, HOXA9, HOXA10 and BMI1 in the CALM-AF10+ cases. Microarray results were validated by quantitative RT-PCR on an independent group of T-ALL and compared to mixed lineage leukemia-translocated acute leukemias (MLL-t AL). The overexpression of HOXA genes was associated with overexpression of its cofactor MEIS1 in CALM-AF10+ T-ALL, reaching levels of expression similar to those observed in MLL-t AL. Consequently, CALM-AF10+ T-ALL and MLL-t AL share a specific HOXA overexpression, indicating they activate common oncogenic pathways. In addition, BMI1, located close to AF10 breakpoint, was overexpressed only in CALM-AF10+ T-ALL and not in MLL-t AL. BMI1 controls cellular proliferation through suppression of the tumor suppressors encoded by the CDKN2A locus. This locus, often deleted in T-ALL, was conserved in CALM-AF10+ T-ALL. This suggests that decreased CDKN2A activity, as a result of BMI1 overexpression, contributes to leukemogenesis in CALM-AF10+ T-ALL. We propose to define a HOXA+ leukemia group composed of at least MLL-t, CALM-AF10 and HOXA-t AL, which may benefit from adapted management.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Cell Proliferation
  • Cell Transformation, Neoplastic
  • Child
  • Gene Expression Profiling
  • Homeodomain Proteins / biosynthesis*
  • Homeodomain Proteins / physiology
  • Humans
  • Leukemia-Lymphoma, Adult T-Cell / genetics*
  • Leukemia-Lymphoma, Adult T-Cell / physiopathology*
  • Nuclear Proteins / biosynthesis*
  • Nuclear Proteins / physiology
  • Oligonucleotide Array Sequence Analysis
  • Oncogene Proteins, Fusion / biosynthesis*
  • Polycomb Repressive Complex 1
  • Proto-Oncogene Proteins / biosynthesis*
  • Proto-Oncogene Proteins / physiology
  • Repressor Proteins / biosynthesis*
  • Repressor Proteins / physiology
  • Reverse Transcriptase Polymerase Chain Reaction
  • Transcription, Genetic
  • Up-Regulation

Substances

  • AF10-CALM fusion protein, human
  • BMI1 protein, human
  • Homeodomain Proteins
  • Nuclear Proteins
  • Oncogene Proteins, Fusion
  • Proto-Oncogene Proteins
  • Repressor Proteins
  • HoxA protein
  • Polycomb Repressive Complex 1