Analysis of the excision step in human DNA mismatch repair

Methods Enzymol. 2006:408:273-84. doi: 10.1016/S0076-6879(06)08017-7.

Abstract

The reaction responsible for replication error correction by mismatch repair proceeds via several steps: mismatch recognition, mismatch-provoked excision, repair DNA synthesis, and ligation. Key steps in this process are the recognition and subsequent exonucleolytic removal of the mispair. A minimal system comprised of human MutSalpha (MSH2*MSH6), MutLalpha (MLH1*PMS2), exonuclease I (EXOI), replication protein A (RPA), proliferating cell nuclear antigen (PCNA), and replication factor C (RFC) is sufficient to support mismatch-provoked excision in vitro. This chapter describes methods for analysis of the reconstituted excision reaction.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Base Pair Mismatch
  • DNA Damage
  • DNA Mismatch Repair*
  • DNA Repair Enzymes
  • DNA-Binding Proteins / metabolism
  • Exodeoxyribonucleases / metabolism
  • Humans
  • MutL Proteins
  • MutS Homolog 2 Protein / metabolism
  • Neoplasm Proteins / metabolism
  • Proliferating Cell Nuclear Antigen / metabolism
  • Replication Protein A / metabolism
  • Replication Protein C / metabolism

Substances

  • DNA-Binding Proteins
  • G-T mismatch-binding protein
  • MutLalpha protein, human
  • Neoplasm Proteins
  • Proliferating Cell Nuclear Antigen
  • Replication Protein A
  • Exodeoxyribonucleases
  • exodeoxyribonuclease I
  • MSH2 protein, human
  • MutL Proteins
  • MutS Homolog 2 Protein
  • Replication Protein C
  • DNA Repair Enzymes