Haplotypes linked to three rare beta-thalassemia mutations, originally reported in Tunisia

Hemoglobin. 2006;30(2):175-81. doi: 10.1080/03630260600642427.

Abstract

The polymorphism of the beta-globin gene haplotypes and frameworks are useful in the determination of the unicentric and multicentric origin of a mutational event. In order to improve our knowledge of the chromosomal background of the beta-globin gene in three beta-thalassemia (thal) mutations originally reported in Tunisia, namely codons 25/26 (+T), codon 30 (G-->C) and IVS-I-2 (T-->G), we have investigated 13 unrelated individuals. There were five non transfusion-dependent patients homozygous for the IVS-I-2 (T-->G) mutation, five others were homozygous for the codon 30 (G-->C) mutation, one was a homozygote for the codons 25/26 (+T) insertion mutation and one patient was a compound heterozygote for the codon 39 (C-->T) and codon 25/26 (+T) mutations; the last patient had a betaS/codon 25/26 (+T) compound heterozygous genotype. Haplotype analysis was carried out by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) based methods. The framework polymorphism was established by direct sequencing. beta-Globin gene analyses demonstrated that all IVS-I-2 (T-->G) cases were associated with haplotype IX; the codon 30 (G-->C) mutation was supported by haplotype I, while the codons 25/26 (+T) mutation was linked to haplotypes I and IX.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Codon / genetics
  • DNA Mutational Analysis
  • Ethnicity / genetics
  • Female
  • Globins / genetics*
  • Haplotypes / genetics*
  • Heterozygote
  • Homozygote
  • Humans
  • Male
  • Mutagenesis, Insertional
  • Mutation*
  • Mutation, Missense
  • Pedigree
  • Phenotype
  • Point Mutation
  • Polymerase Chain Reaction
  • Polymorphism, Restriction Fragment Length
  • Sickle Cell Trait / complications
  • Sickle Cell Trait / genetics
  • Tunisia
  • beta-Thalassemia / complications
  • beta-Thalassemia / genetics*

Substances

  • Codon
  • Globins