Lysine 190 is the catalytic base in MenF, the menaquinone-specific isochorismate synthase from Escherichia coli: implications for an enzyme family

Biochemistry. 2007 Jan 30;46(4):946-53. doi: 10.1021/bi0608515.

Abstract

Menaquinone biosynthesis is initiated by the conversion of chorismate to isochorismate, a reaction that is catalyzed by the menaquinone-specific isochorismate synthase, MenF. The catalytic mechanism of MenF has been probed using a combination of structural and biochemical studies, including the 2.5 A structure of the enzyme, and Lys190 has been identified as the base that activates water for nucleophilic attack at the chorismate C2 carbon. MenF is a member of a larger family of Mg2+ dependent chorismate binding enzymes catalyzing distinct chorismate transformations. The studies reported here extend the mechanism recently proposed for this enzyme family by He et al.: He, Z., Stigers Lavoie, K. D., Bartlett, P. A., and Toney, M. D. (2004) J. Am. Chem. Soc. 126, 2378-85.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Catalytic Domain
  • Chorismic Acid / metabolism
  • Crystallography, X-Ray
  • DNA, Bacterial / genetics
  • Escherichia coli / enzymology*
  • Escherichia coli / genetics
  • Intramolecular Transferases / chemistry*
  • Intramolecular Transferases / genetics
  • Intramolecular Transferases / metabolism*
  • Kinetics
  • Lysine / chemistry
  • Models, Molecular
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sequence Homology, Amino Acid
  • Substrate Specificity
  • Vitamin K 2 / metabolism*

Substances

  • DNA, Bacterial
  • Recombinant Proteins
  • Vitamin K 2
  • Intramolecular Transferases
  • isochorismate synthase
  • Chorismic Acid
  • Lysine

Associated data

  • PDB/2EUA