Systematic assessment of the tagging polymorphisms of the COL1A1 gene for high myopia

J Hum Genet. 2007;52(4):374-377. doi: 10.1007/s10038-007-0117-6. Epub 2007 Feb 2.

Abstract

Reduced scleral collagen accumulation has been found in the development of myopia. Single nucleotide polymorphisms (SNPs) at the type I collagen alpha-1 gene (COL1A1) may cause different susceptibilities to myopia. We conducted a case-control study to systematically examine COL1A1 as a candidate gene for high myopia. A case was defined as spherical refraction <or=-6 D and control >or=-1.5 D. The study comprised 471 cases and 623 controls, and ten tagging SNPs were genotyped. None of the SNPs reached the significant level of 0.05. Subset analysis on cases with a strong family history did not demonstrate significant results. We could not find an interaction between gene and near work. Exploratory analyses by changing the cutoff values to re-define cases and controls did not improve the results. Haplotype analysis did not yield significant association with myopia. This study failed to demonstrate COL1A1 as a significant risk factor for high myopia.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Asian People / genetics
  • Case-Control Studies
  • Collagen Type I / genetics*
  • Collagen Type I, alpha 1 Chain
  • Female
  • Haplotypes
  • Humans
  • Male
  • Myopia / genetics*
  • Polymorphism, Single Nucleotide*
  • Risk Factors
  • Taiwan / ethnology

Substances

  • Collagen Type I
  • Collagen Type I, alpha 1 Chain