Polymorphisms in NFKBIA and ICAM-1 genes in New Zealand Caucasian Crohn's disease patients

J Gastroenterol Hepatol. 2007 Oct;22(10):1666-70. doi: 10.1111/j.1440-1746.2007.05020.x. Epub 2007 Jun 25.

Abstract

Background and aim: Crohn's disease (CD) is a complex polygenetic inflammatory disease of the bowel. NFKBIA (IkappaBalpha) is a downstream regulator of NF-kappaB, which is an effector of the major Crohn's susceptibility gene CARD15/NOD2. ICAM-1 is an integrin ligand and vascular addressin, which contributes to the trafficking of pathogenic leukocytes into the inflamed bowel. Here we examined whether the NFKBIA 2758G/A and ICAM-1 K469E variants, recently shown to be CD susceptibility genes in Caucasian populations in Germany and the United Kingdom, are associated with CD in Caucasian patients in New Zealand.

Methods: PCR-RFLP analysis was used to examine the frequency of gene polymorphisms in 182 CD patients and 188 ethnically matched controls.

Results: There was no significant evidence of a difference in the allele frequency of either the 2758G/A polymorphism in NFKBIA (0.38 vs 0.35, P = 0.47) or the K469E polymorphism in ICAM-1 (0.43 vs 0.37, P = 0.10) between CD patients and controls. Nevertheless, the ICAM-1 469E allele significantly (P = 0.016, Pc = 0.047) influenced the age of diagnosis of CD. Meta-analysis with five other studies confirmed a lack of association of the K469E polymorphism with Crohn's disease (P = 0.33; OR = 0.93; 95% CI, 0.82-1.07).

Conclusion: The NFKBIA 2758G/A and ICAM-1 K469E polymorphisms are not significant risk factors for CD in New Zealand; however, there is evidence that the latter polymorphism influences the age of diagnosis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Age Factors
  • Chi-Square Distribution
  • Crohn Disease / ethnology
  • Crohn Disease / genetics*
  • Female
  • Gene Frequency
  • Genotype
  • Humans
  • I-kappa B Proteins / genetics*
  • Intercellular Adhesion Molecule-1 / genetics*
  • Logistic Models
  • Male
  • NF-KappaB Inhibitor alpha
  • New Zealand
  • Polymerase Chain Reaction
  • Polymorphism, Genetic*
  • Polymorphism, Restriction Fragment Length
  • Polymorphism, Single Nucleotide
  • Promoter Regions, Genetic
  • White People

Substances

  • I-kappa B Proteins
  • NFKBIA protein, human
  • Intercellular Adhesion Molecule-1
  • NF-KappaB Inhibitor alpha