Gene expression time course in the human skin during elicitation of allergic contact dermatitis

J Invest Dermatol. 2007 Nov;127(11):2585-95. doi: 10.1038/sj.jid.5700902. Epub 2007 Jun 28.

Abstract

Genes involved in the inflammatory response resulting in allergic contact dermatitis (ACD) are only partly known. In this study, we introduce the use of high-density oligonucleotide arrays for gene expression profiling in human skin during the elicitation of ACD. Skin biopsies from normal and nickel-exposed skin were obtained from seven nickel-allergic patients and five nonallergic controls at four different time points during elicitation of eczema. Each gene expression profile was analyzed by hybridization to high-density oligonucleotide arrays. Cluster analysis of 74 genes found to be differentially expressed in the patients over time revealed that the patient samples may be categorized into two groups: an early time-point group (no clinical reaction) and a late time-point group (clinical reaction). Bioinformatics analyses unraveled the potential involvement of signal transducers and activator of transcription and small/mothers against decepentaplegic (SMAD) transcription factors in the late time-point gene expression patterns. Concerning specific genes, the homeostatic chemokine CCL19 was unexpectedly found to be highly expressed in cells scattered in the deep dermis of the late time-point samples. Taken together, these findings suggest hitherto unknown roles of SMAD transcription factors and of CCL19 in the elicitation phase of ACD.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Biopsy
  • Chemokine CCL19
  • Chemokines, CC / genetics
  • Chemokines, CC / metabolism
  • Cluster Analysis
  • Dermatitis, Allergic Contact / genetics*
  • Dermatitis, Allergic Contact / metabolism*
  • Down-Regulation / genetics
  • Female
  • Gene Expression Profiling*
  • Humans
  • Middle Aged
  • Multivariate Analysis
  • Oligonucleotide Array Sequence Analysis
  • Skin / metabolism*
  • Skin / pathology
  • Smad Proteins / genetics
  • Smad Proteins / metabolism
  • Transcription Factors / physiology
  • Transforming Growth Factor beta / genetics
  • Transforming Growth Factor beta / metabolism
  • Up-Regulation / genetics

Substances

  • CCL19 protein, human
  • Chemokine CCL19
  • Chemokines, CC
  • Smad Proteins
  • Transcription Factors
  • Transforming Growth Factor beta