Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression

Science. 2007 Dec 14;318(5857):1777-9. doi: 10.1126/science.1145989.

Abstract

RNA polymerase II (Pol II) transcribes genes that encode proteins and noncoding small nuclear RNAs (snRNAs). The carboxyl-terminal repeat domain (CTD) of the largest subunit of mammalian RNA Pol II, comprising tandem repeats of the heptapeptide consensus Tyr1-Ser2-Pro3-Thr4-Ser5-Pro6-Ser7, is required for expression of both gene types. We show that mutation of serine-7 to alanine causes a specific defect in snRNA gene expression. We also present evidence that phosphorylation of serine-7 facilitates interaction with the snRNA gene-specific Integrator complex. These findings assign a biological function to this amino acid and highlight a gene type-specific requirement for a residue within the CTD heptapeptide, supporting the existence of a CTD code.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alanine
  • Amino Acid Sequence
  • Cell Line
  • Consensus Sequence
  • Gene Expression Regulation*
  • Heterogeneous-Nuclear Ribonucleoproteins / genetics
  • Humans
  • Mutation
  • Oligopeptides / chemistry
  • Oligopeptides / metabolism
  • Phosphorylation
  • Protein Structure, Tertiary
  • Protein Subunits / genetics
  • Protein Subunits / metabolism
  • RNA Polymerase II / chemistry
  • RNA Polymerase II / genetics
  • RNA Polymerase II / metabolism*
  • RNA Processing, Post-Transcriptional
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA, Small Nuclear / genetics*
  • Serine / metabolism*
  • Templates, Genetic
  • Transcription, Genetic*

Substances

  • Heterogeneous-Nuclear Ribonucleoproteins
  • Oligopeptides
  • Protein Subunits
  • RNA, Messenger
  • RNA, Small Nuclear
  • U2 small nuclear RNA
  • Serine
  • RNA Polymerase II
  • Alanine