NF-kappaB-dependent genes induced by proteinuria and identified using DNA microarrays

Clin Exp Nephrol. 2008 Jun;12(3):181-8. doi: 10.1007/s10157-008-0038-5. Epub 2008 Feb 15.

Abstract

Background: A close correlation has been shown between tubulointerstitial (TI) injury and the outcome of renal dysfunction, and nuclear factor-kappaB (NFkappaB) has been shown to play a key role in proteinuria-induced TI injury. To explore the molecular mechanisms of the proteinuria-induced TI injury further, we have analyzed renal gene expression with DNA microarrays, with and without specific inhibition of NF-kappaB in the proximal tubules.

Methods: Unilaterally nephrectomized rats loaded with bovine serum albumin (BSA) were used as a model of proteinuric renal injury. Renal NF-kappaB activation was inhibited by gene transfer of the truncated form of IkappaBalpha (inhibitor of NF-kappaB) via the injection of a recombinant adenovirus vector into the renal artery, an method established in a previous study. Total RNA was extracted from the kidney and analyzed with a DNA microarrays containing 1081 genes.

Results: Renal NF-kappaB activation and TI injury in BSA-loaded proteinuric rats were inhibited by the gene transfer of the truncated form of IkappaBalpha. DNA microarray analysis revealed 45 up-regulated genes and six down-regulated genes in the proteinuric rats, and expression of 23 of these 51 genes was significantly altered by NF-kappaB inhibition. Among these 23 genes, we focused on clusterin and confirmed the results of microarray analysis by Western blotting and PCR.

Conclusion: In this study, 23 genes of 51 proteinuria-related genes were regulated by NF-kappaB activation, suggesting that some of these genes may serve as target molecules for the treatment of progressive TI injury.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis
  • Clusterin / genetics
  • Clusterin / metabolism
  • DNA / genetics
  • Disease Models, Animal
  • Female
  • Gene Expression Regulation
  • I-kappa B Proteins / genetics
  • In Situ Nick-End Labeling
  • NF-kappa B / genetics*
  • NF-kappa B / metabolism*
  • Nephrectomy
  • Nephritis, Interstitial / etiology
  • Nephritis, Interstitial / metabolism
  • Oligonucleotide Array Sequence Analysis*
  • Proteinuria / complications
  • Proteinuria / metabolism*
  • Rats
  • Rats, Wistar

Substances

  • Clusterin
  • I kappa B beta protein
  • I-kappa B Proteins
  • NF-kappa B
  • DNA