Epigenetic regulation of the human mucin gene MUC4 in epithelial cancer cell lines involves both DNA methylation and histone modifications mediated by DNA methyltransferases and histone deacetylases

FASEB J. 2008 Aug;22(8):3035-45. doi: 10.1096/fj.07-103390. Epub 2008 May 20.

Abstract

The human gene MUC4 encodes a transmembrane mucin, ligand of ErbB2, that is associated with pancreatic tumor progression. In the normal pancreas, MUC4 is not expressed, whereas activation of its expression is observed in the early steps of pancreatic carcinogenesis. The molecular mechanisms responsible for MUC4 gene activation are however still unknown. The MUC4 5'-flanking region being GC-rich and including two CpG islands, we hypothesized that epigenetic regulation may be involved and undertook to decipher the molecular phenomenons implied. By treating cancer cell lines with 5-aza-2'-deoxycytidine (5-aza) and trichostatin A (TSA), we were able to restore MUC4 expression in a cell-specific manner. We showed by bisulfite-treated genomic DNA sequencing and chromatin immunoprecipitation that methylation of five CpG sites and establishment of a repressive histone code at the 5'-untranslated region were associated with MUC4 silencing and impaired its activation by Sp1. Direct involvement of DNMT3A, DNMT3B, HDAC1, and HDAC3 was demonstrated by RNA interference and chromatin immunoprecipitation. Moreover, inhibition of histone deacetylation by TSA was associated with strong MUC4 repression in high-expressing cells. In conclusion, this work shows for the first time the importance of epigenetics in regulating MUC4 expression and may represent a new strategy to inhibit its expression in epithelial tumors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions
  • Base Sequence
  • Cell Line, Tumor
  • CpG Islands
  • DNA (Cytosine-5-)-Methyltransferases / metabolism
  • DNA Methylation
  • DNA Methyltransferase 3A
  • DNA Methyltransferase 3B
  • DNA Modification Methylases / metabolism*
  • DNA Primers / genetics
  • DNA, Neoplasm / chemistry
  • DNA, Neoplasm / genetics
  • DNA, Neoplasm / metabolism
  • Epigenesis, Genetic*
  • Histone Deacetylase 1
  • Histone Deacetylases / metabolism*
  • Histones / metabolism
  • Humans
  • Mucin-4
  • Mucins / genetics*
  • Mutagenesis, Site-Directed
  • Neoplasms, Glandular and Epithelial / genetics*
  • Neoplasms, Glandular and Epithelial / metabolism*
  • Pancreatic Neoplasms / genetics*
  • Pancreatic Neoplasms / metabolism*
  • RNA Interference
  • RNA, Small Interfering / genetics
  • Sp1 Transcription Factor / metabolism
  • Stomach Neoplasms / genetics
  • Stomach Neoplasms / metabolism

Substances

  • 5' Untranslated Regions
  • DNA Primers
  • DNA, Neoplasm
  • DNMT3A protein, human
  • Histones
  • MUC4 protein, human
  • Mucin-4
  • Mucins
  • RNA, Small Interfering
  • Sp1 Transcription Factor
  • DNA Modification Methylases
  • DNA (Cytosine-5-)-Methyltransferases
  • DNA Methyltransferase 3A
  • HDAC1 protein, human
  • Histone Deacetylase 1
  • Histone Deacetylases
  • histone deacetylase 3