Association of single nucleotide polymorphisms in GATA-3 with allergic rhinitis

Acta Otolaryngol. 2009 Feb;129(2):190-4. doi: 10.1080/00016480802139846.

Abstract

Conclusion: The results of our study demonstrated the association between the single nucleotide polymorphisms (SNPs) of GATA-3 and allergic rhinitis (AR).

Objective: AR is considered to be controlled by T-helper type 2 (Th2) cells. GATA-3 is the crucial transcription factor controlling the differentiation and function of Th2 cells. We aimed to evaluate the association between the SNPs of GATA-3 and AR.

Subjects and methods: GATA-3 SNPs in 109 AR patients and 112 healthy controls in China were detected with restriction fragment length polymorphism.

Results: The genotypes at rs1269486 were GG, GA, and AA, and the genotypes at rs2229360 were CC, CT, and TT. The frequency of the G allele in the patient group was significantly higher than that in the control group (p<0.01), while the frequency of the A allele in the patient group was significantly lower than that in the control group (p<0.01). Meanwhile, the haplotype frequency of GC at the two loci in the patient group was significantly higher than that in the control group (p<0.01), and the haplotype frequency of AC in the patient group was significantly lower than that in the control group (p<0.01).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Alleles*
  • Allergens / immunology
  • Animals
  • Child
  • China
  • Chromosome Mapping
  • Codon, Terminator / genetics
  • Female
  • GATA3 Transcription Factor / genetics*
  • Gene Frequency / genetics
  • Genotype
  • Haplotypes
  • Humans
  • Immunoglobulin E / blood
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide / genetics*
  • Promoter Regions, Genetic / genetics
  • Pyroglyphidae / immunology
  • Reference Values
  • Rhinitis, Allergic, Perennial / genetics*
  • Rhinitis, Allergic, Perennial / immunology
  • Young Adult

Substances

  • Allergens
  • Codon, Terminator
  • GATA3 Transcription Factor
  • GATA3 protein, human
  • Immunoglobulin E