Selective repression of YKL-40 by NF-kappaB in glioma cell lines involves recruitment of histone deacetylase-1 and -2

FEBS Lett. 2008 Sep 22;582(21-22):3193-200. doi: 10.1016/j.febslet.2008.08.010. Epub 2008 Aug 15.

Abstract

Here we show that in contrast to other cancer types, tumor necrosis factor (TNF)-alpha suppresses YKL-40 expression in glioma cell lines in a nuclear factor kappaB (NF-kappaB) dependent manner. Even though TNF-alpha causes recruitment of p65 and p50 subunits of NF-kappaB to the YKL-40 promoter in all cell types, recruitment of histone deacetylases (HDAC)-1 and -2, and a consequent deacetylation of histone H3 at the YKL-40 promoter occurs only in glioma cells. Importantly, using chromatin immunoprecipitation assays in frozen glioblastoma multiforme tissues, we show that YKL-40 levels decrease consistent with HDAC1 recruitment despite high levels of nuclear p-p65. This study presents a paradigm for NF-kappaB regulation of one of its targets in a strict cell type specific manner.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Adipokines
  • Cell Line, Tumor
  • Chitinase-3-Like Protein 1
  • Chromatin Immunoprecipitation
  • Down-Regulation
  • Gene Expression Regulation, Neoplastic*
  • Glioma / genetics
  • Glioma / metabolism*
  • Glycoproteins / genetics*
  • Histone Deacetylase 1
  • Histone Deacetylase 2
  • Histone Deacetylases / metabolism*
  • Histones / metabolism
  • Humans
  • Lectins
  • NF-kappa B / metabolism*
  • NF-kappa B p50 Subunit / metabolism
  • Promoter Regions, Genetic
  • Repressor Proteins / metabolism*
  • Transcription Factor RelA / metabolism
  • Tumor Necrosis Factor-alpha / pharmacology
  • Tumor Necrosis Factor-alpha / physiology

Substances

  • Adipokines
  • CHI3L1 protein, human
  • Chitinase-3-Like Protein 1
  • Glycoproteins
  • Histones
  • Lectins
  • NF-kappa B
  • NF-kappa B p50 Subunit
  • Repressor Proteins
  • Transcription Factor RelA
  • Tumor Necrosis Factor-alpha
  • HDAC1 protein, human
  • Histone Deacetylase 1
  • Histone Deacetylase 2
  • Histone Deacetylases