Cross-strand pairing and amyloid assembly

Biochemistry. 2008 Sep 23;47(38):10018-26. doi: 10.1021/bi801081c. Epub 2008 Aug 30.

Abstract

Amino acid cross-strand pairing interactions along a beta-sheet surface have been implicated in protein beta-structural assembly and stability, yet the relative contributions have been difficult to evaluate directly. Here we develop the central core sequence of the Abeta peptide associated with Alzheimer's disease, Abeta(16-22), as an experimental system for evaluating these interactions. The peptide allows for internal comparisons between electrostatic and steric interactions within the beta-sheet and an evaluation of these cross-strand pair contributions to beta-sheet registry. A morphological transition from fibers to hollow nanotubes arises from changes in beta-sheet surface complementarity and provides a convenient indicator of the beta-strand strand registry. The intrinsic beta-sequence and pair correlations are critical to regulate secondary assembly. These studies provide evidence for a critical desolvation step that is not present in most models of the nucleation-dependent pathway for amyloid assembly.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amyloid / chemistry*
  • Amyloid / metabolism*
  • Amyloid / ultrastructure
  • Amyloid beta-Peptides / chemical synthesis
  • Amyloid beta-Peptides / chemistry*
  • Amyloid beta-Peptides / metabolism*
  • Amyloid beta-Peptides / ultrastructure
  • Computational Biology
  • Humans
  • Models, Molecular
  • Nanotubes / chemistry
  • Nanotubes / ultrastructure
  • Protein Folding
  • Protein Processing, Post-Translational
  • Protein Structure, Secondary / physiology
  • Scattering, Radiation
  • Surface Properties
  • X-Rays

Substances

  • Amyloid
  • Amyloid beta-Peptides