XLF-Cernunnos promotes DNA ligase IV-XRCC4 re-adenylation following ligation

Nucleic Acids Res. 2009 Feb;37(2):482-92. doi: 10.1093/nar/gkn957. Epub 2008 Dec 4.

Abstract

XLF-Cernunnos (XLF) is a component of the DNA ligase IV-XRCC4 (LX) complex, which functions during DNA non-homologous end joining (NHEJ). Here, we use biochemical and cellular approaches to probe the impact of XLF on LX activities. We show that XLF stimulates adenylation of LX complexes de-adenylated by pyrophosphate or following LX decharging during ligation. XLF enhances LX ligation activity in an ATP-independent and dependent manner. ATP-independent stimulation can be attributed to enhanced end-bridging. Whilst ATP alone fails to stimulate LX ligation activity, addition of XLF and ATP promotes ligation in a manner consistent with XLF-stimulated readenylation linked to ligation. We show that XLF is a weakly bound partner of the tightly associated LX complex and, unlike XRCC4, is dispensable for LX stability. 2BN cells, which have little, if any, residual XLF activity, show a 3-fold decreased ability to repair DNA double strand breaks covering a range of complexity. These findings strongly suggest that XLF is not essential for NHEJ but promotes LX adenylation and hence ligation. We propose a model in which XLF, by in situ recharging DNA ligase IV after the first ligation event, promotes double stranded ligation by a single LX complex.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Monophosphate / metabolism
  • Adenosine Triphosphate / metabolism
  • Animals
  • Cell Line
  • Cells, Cultured
  • Cricetinae
  • DNA Breaks, Double-Stranded*
  • DNA Ligase ATP
  • DNA Ligases / metabolism*
  • DNA Repair*
  • DNA-Binding Proteins / metabolism*
  • Etoposide / toxicity
  • Humans
  • Mice
  • Zinostatin / toxicity

Substances

  • DNA-Binding Proteins
  • LIG4 protein, human
  • Adenosine Monophosphate
  • Etoposide
  • Adenosine Triphosphate
  • Zinostatin
  • DNA Ligases
  • DNA Ligase ATP