Identification of a putative lysosomal cobalamin exporter altered in the cblF defect of vitamin B12 metabolism

Nat Genet. 2009 Feb;41(2):234-9. doi: 10.1038/ng.294. Epub 2009 Jan 11.

Abstract

Vitamin B(12) (cobalamin) is essential in animals for metabolism of branched chain amino acids and odd chain fatty acids, and for remethylation of homocysteine to methionine. In the cblF inborn error of vitamin B(12) metabolism, free vitamin accumulates in lysosomes, thus hindering its conversion to cofactors. Using homozygosity mapping in 12 unrelated cblF individuals and microcell-mediated chromosome transfer, we identified a candidate gene on chromosome 6q13, LMBRD1, encoding LMBD1, a lysosomal membrane protein with homology to lipocalin membrane receptor LIMR. We identified five different frameshift mutations in LMBRD1 resulting in loss of LMBD1 function, with 18 of the 24 disease chromosomes carrying the same mutation embedded in a common 1.34-Mb haplotype. Transfection of fibroblasts of individuals with cblF with wild-type LMBD1 rescued cobalamin coenzyme synthesis and function. This work identifies LMBRD1 as the gene underlying the cblF defect of cobalamin metabolism and suggests that LMBD1 is a lysosomal membrane exporter for cobalamin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Child
  • Chromosome Deletion
  • Chromosome Mapping
  • Chromosomes, Human, Pair 6
  • Female
  • HeLa Cells
  • Humans
  • Hyperhomocysteinemia / complications*
  • Hyperhomocysteinemia / genetics
  • Lysosomal Membrane Proteins / metabolism
  • Male
  • Membrane Transport Proteins / deficiency*
  • Membrane Transport Proteins / genetics
  • Membrane Transport Proteins / metabolism
  • Methylmalonic Acid / metabolism*
  • Methylmalonic Acid / urine
  • Nucleocytoplasmic Transport Proteins / genetics
  • Nucleocytoplasmic Transport Proteins / metabolism
  • Nucleocytoplasmic Transport Proteins / physiology
  • Polymorphism, Genetic
  • Proteins / genetics*
  • Proteins / isolation & purification
  • Proteins / metabolism
  • Tissue Distribution
  • Transcobalamins / genetics*
  • Transcobalamins / isolation & purification
  • Transcobalamins / metabolism
  • Vitamin B 12 / metabolism*
  • Vitamin B 12 Deficiency / etiology
  • Vitamin B 12 Deficiency / genetics*
  • Vitamin B 12 Deficiency / metabolism

Substances

  • LAMP1 protein, human
  • LMBRD1 protein, human
  • Lysosomal Membrane Proteins
  • Membrane Transport Proteins
  • Nucleocytoplasmic Transport Proteins
  • Proteins
  • Transcobalamins
  • lysosomal proteins
  • Methylmalonic Acid
  • Vitamin B 12

Associated data

  • RefSeq/NP_060583
  • RefSeq/NP_071903