A quantitative trait locus for SBP maps near KCNB1 and PTGIS in a population isolate

Am J Hypertens. 2009 Jun;22(6):663-8. doi: 10.1038/ajh.2009.46. Epub 2009 Mar 5.

Abstract

Background: Population isolates are characterized by simplified genetic background and as such present promising opportunities for studying complex diseases. We performed a genome-wide linkage analysis for systolic (SBP) and diastolic blood pressure (DBP) followed up by the association analysis in the Croatian isolated island of Vis, where a very high prevalence of hypertension was reported (75%).

Methods: Variance-components linkage analysis was used to map quantitative trait loci (QTL) for SBP and DBP in 125 families with 1,389 members. Follow-up association analysis was performed in a sample of 421 subjects from the island of Vis. The 15 top-ranking single nucleotide polymorphisms (SNPs) were selected and tested for the association by in silico replication in the British 1958 Birth Cohort DNA Collection.

Results: Linkage results showed evidence for a QTL influencing DBP (lod = 1.89) on chromosome 7p14.2 and two QTL influencing SBP (lod = 2.03 on chromosome 1p36 and lod = 1.75 on chromosome 20q13). For the association results, the replication was observed for the rs237484 polymorphism on chromosome 20 that was associated with SBP with the effect size beta = -5.2 (P = 0.001; per A allele) in Vis population and beta = -1.1 (P = 0.04) in the British 1958 Birth Cohort. rs237484 is in proximity to the potassium voltage gate channel gene (KCNB1) and close to the prostaglandin I2 (prostacyclin) synthase gene (PTGIS).

Conclusions: These results provide evidence of a QTL influencing blood pressure (BP) variability in this region and support the notion that the isolated population of the island of Vis is a suitable population for conducting linkage and association analyses of cardiovascular-related phenotypes.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Blood Pressure / physiology*
  • Croatia / epidemiology
  • Cytochrome P-450 Enzyme System / genetics*
  • DNA / genetics*
  • Female
  • Follow-Up Studies
  • Genetic Linkage*
  • Humans
  • Hypertension / epidemiology
  • Hypertension / genetics*
  • Hypertension / physiopathology
  • Male
  • Middle Aged
  • Phenotype
  • Polymerase Chain Reaction
  • Prevalence
  • Quantitative Trait Loci*
  • Shab Potassium Channels / genetics*
  • Systole

Substances

  • KCNB1 protein, human
  • Shab Potassium Channels
  • DNA
  • Cytochrome P-450 Enzyme System
  • PTGIS protein, human