Genetic contribution of chemokine receptor 2 (CCR2) polymorphisms towards increased serum total IgE levels in Indian asthmatics

Genomics. 2009 Sep;94(3):161-8. doi: 10.1016/j.ygeno.2009.05.013. Epub 2009 Jun 9.

Abstract

The chemokine (C-C motif) receptors (CCR) 2 and 5 are members of a large family of G protein-coupled receptors, playing important roles in asthma pathogenesis. Using standard sequencing techniques, a total of 15 single nucleotide and 8 insertion/deletion polymorphisms (DIPs) (5 novels) were identified in and around these two genes. None of the studied polymorphisms (N=7, selected on the basis on linkage disequilibrium) was associated with asthma in a case (N=315) - control (N=337) study and showed no evidence for non-random transmission to individuals with asthma/atopy in Indian pedigrees (n=235). However, multilocus haplotype analysis based on simulations yielded a P=0.00005 in the case-control study and a P=0.03 for the family-based association studies. Furthermore, rs3918356 and rs743660 polymorphisms in CCR2 were found to be associated with total serum IgE levels in both the study designs. Thus, our study supports a significant role for chemokine receptor polymorphisms in genetic susceptibility to asthma.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Asthma / blood*
  • Asthma / genetics*
  • Asthma / metabolism
  • Case-Control Studies
  • Genetic Linkage
  • Genetic Markers / genetics
  • Genetic Predisposition to Disease
  • Haplotypes / genetics*
  • Humans
  • Immunoglobulin E / blood*
  • India
  • Linkage Disequilibrium
  • Polymorphism, Genetic / genetics*
  • Receptors, CCR2 / genetics*

Substances

  • CCR2 protein, human
  • Genetic Markers
  • Receptors, CCR2
  • Immunoglobulin E