Aberrant methylation of APC, MGMT, RASSF2A, and Wif-1 genes in plasma as a biomarker for early detection of colorectal cancer

Clin Cancer Res. 2009 Oct 1;15(19):6185-91. doi: 10.1158/1078-0432.CCR-09-0111. Epub 2009 Sep 22.

Abstract

Purpose: To identify epigenetic molecular makers in plasma for the early detection of colorectal cancer.

Experimental design: We retrospectively analyzed the methylation status of 10 genes in fresh-frozen tissues and corresponding plasma samples from 243 patients with stage I and II sporadic colorectal cancer, 276 healthy individuals, and plasma from 64 colorectal adenoma patients using methylation-specific PCR. The methylation score (Mscore) was used to find molecular markers with high sensitivity and specificity.

Results: Of the 243 colorectal cancer tissues, methylation was detected in 18% for p14, 34% for p16, 27% for APC, 34% for DAPK, 32% for HLTF, 21% for hMLH1, 39% for MGMT, 24% for RARbeta2, 58% for RASSF2A, and 74% for Wif-1. Receiver operator characteristic curve analysis in plasma from 243 patients with cancer and 276 healthy individuals showed that the M score of any single gene had a sensitivity of <40% after controlling for age, sex, and tumor location. The specificity of the M score was not different between multigene and single gene analyses, but the sensitivity of the M score was significantly increased by multigene analysis. For all patients, the M score in a model including APC, MGMT, RASSF2A, and Wif-1 genes had a sensitivity of 86.5% and a specificity of 92.1% when 1.6 was used as a cutoff. In this model, the M score had a positive predictive value of 90.6% and a negative predictive value of 88.8%.

Conclusion: The present study suggests that tumor-specific methylation of APC, MGMT, RASSF2A, and Wif-1 genes might be a valuable biomarker in plasma for the early detection of colorectal cancer.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing / blood*
  • Adaptor Proteins, Signal Transducing / genetics
  • Adenoma / blood
  • Adenoma / diagnosis*
  • Adenoma / genetics
  • Aged
  • Biomarkers, Tumor / blood*
  • Biomarkers, Tumor / genetics
  • Colorectal Neoplasms / blood
  • Colorectal Neoplasms / diagnosis*
  • Colorectal Neoplasms / genetics
  • DNA Methylation* / genetics
  • DNA Modification Methylases / blood*
  • DNA Modification Methylases / genetics
  • DNA Repair Enzymes / blood*
  • DNA Repair Enzymes / genetics
  • Early Detection of Cancer / methods
  • Female
  • Genes, APC*
  • Humans
  • Male
  • Middle Aged
  • Plasma / metabolism
  • Protein Isoforms / blood
  • Protein Isoforms / genetics
  • Repressor Proteins / blood*
  • Repressor Proteins / genetics
  • Retrospective Studies
  • Tumor Suppressor Proteins / blood*
  • Tumor Suppressor Proteins / genetics

Substances

  • Adaptor Proteins, Signal Transducing
  • Biomarkers, Tumor
  • Protein Isoforms
  • RASSF2 protein, human
  • Repressor Proteins
  • Tumor Suppressor Proteins
  • WIF1 protein, human
  • DNA Modification Methylases
  • MGMT protein, human
  • DNA Repair Enzymes