Development and validation of a comprehensive mutation and deletion detection assay for SDHB, SDHC, and SDHD

Clin Biochem. 2010 May;43(7-8):700-4. doi: 10.1016/j.clinbiochem.2010.01.016. Epub 2010 Feb 12.

Abstract

Background: Lack of sequencing validation and complexity of deletion testing hinder genetic diagnosis of SDH-associated paraganglioma/pheochromocytoma.

Methods: We developed sequencing assays and multiplex ligation-dependent probe amplification (MLPA) deletion detection for SDHB, SDHC and SDHD. Clinical performance was validated on 141 blinded samples, previously tested at NIH.

Results: Sequencing and deletion detection were highly reproducible and agreed with previous NIH results in 99.3% and 100%, respectively.

Conclusions: DNA sequencing combined with MLPA allows reliable and simplified genotyping of SDHB, SDHC and SDHD.

MeSH terms

  • Adrenal Gland Neoplasms / diagnosis
  • Adrenal Gland Neoplasms / genetics
  • DNA Mutational Analysis / methods*
  • Membrane Proteins / genetics*
  • Nucleic Acid Amplification Techniques
  • Paraganglioma / genetics
  • Pheochromocytoma / diagnosis
  • Pheochromocytoma / genetics
  • Polymerase Chain Reaction
  • Sequence Deletion / genetics
  • Succinate Dehydrogenase / genetics*

Substances

  • Membrane Proteins
  • SDHC protein, human
  • SDHD protein, human
  • SDHB protein, human
  • Succinate Dehydrogenase